| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937062
Identifier: 156937062
GI number: 156937062
Start: 230408
End: 230923
Strand: Reverse
Name: 156937062
Synonym: Igni_0267
Alternate gene names: NA
Gene position: 230923-230408 (Counterclockwise)
Preceding gene: 156937063
Following gene: 156937061
Centisome position: 17.8
GC content: 56.59
Gene sequence:
>516_bases ATGCGCGCTTTGGTAGACGATTCTCTCCTATCCGAACTCAAGATCGAATTCTTAGAGAACGTCGCGTTCAACCTCCTCTA TGAAGAGGCCAAGAACTTGTTCGGGGAGGTCGCGGCGAGGCAGCTGGTGTACAAAATCATGAAGGAGGCCTCCAAAAGTA TGGTGGAGCGCTTTAGGTCTCAAGGCTTGTTGAATGTAAACGACGTAACGACCGCGCTCTCCTTGCCGTGTAAGGCCTTC GGGGTCGCGGCCTCGTGCGAGCGGGAGGGGGACAAGCTGCTCGTCCGGGTGCGCGAGTGCCCCCTTCTGAAGTTCGACGA GGACAAGAGCGGTAGGGCCTGCATCACGATGATGTCTCTAGTCGCCGGGATGGTCGAATCCGTGACGGGGAAGAGGGTTT GCATAATAACGCCGAGGGTCCGCTTCGGAACTTCCTCTGCTGACCTCGTCATCAAGATGTTGAAGAGCAAGCTCCTAGGG GACGAGGAGTGCTTATTCGAGGTCCGGGCCAAGTGA
Upstream 100 bases:
>100_bases GAGGGGGACGAAGAAGTTAAGAAGCTGTTGGAGGAGGCCGGAATCGAGGTGAGCTCAAAGTAACTTTTTTAAAGACTTAC CGACGAGTAGGTAAAAACGG
Downstream 100 bases:
>100_bases CCCGGAGGACGCCTTGTACGTCCTCGGCATAGAGAGCACCGCCCACACCATAGGGGTGGGAATAGTTAACGAGAGGGCAG AGGTGCTGGCGAACGAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRALVDDSLLSELKIEFLENVAFNLLYEEAKNLFGEVAARQLVYKIMKEASKSMVERFRSQGLLNVNDVTTALSLPCKAF GVAASCEREGDKLLVRVRECPLLKFDEDKSGRACITMMSLVAGMVESVTGKRVCIITPRVRFGTSSADLVIKMLKSKLLG DEECLFEVRAK
Sequences:
>Translated_171_residues MRALVDDSLLSELKIEFLENVAFNLLYEEAKNLFGEVAARQLVYKIMKEASKSMVERFRSQGLLNVNDVTTALSLPCKAF GVAASCEREGDKLLVRVRECPLLKFDEDKSGRACITMMSLVAGMVESVTGKRVCIITPRVRFGTSSADLVIKMLKSKLLG DEECLFEVRAK >Mature_171_residues MRALVDDSLLSELKIEFLENVAFNLLYEEAKNLFGEVAARQLVYKIMKEASKSMVERFRSQGLLNVNDVTTALSLPCKAF GVAASCEREGDKLLVRVRECPLLKFDEDKSGRACITMMSLVAGMVESVTGKRVCIITPRVRFGTSSADLVIKMLKSKLLG DEECLFEVRAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19047; Mature: 19047
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVDDSLLSELKIEFLENVAFNLLYEEAKNLFGEVAARQLVYKIMKEASKSMVERFRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLLNVNDVTTALSLPCKAFGVAASCEREGDKLLVRVRECPLLKFDEDKSGRACITMMSL CCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHH VAGMVESVTGKRVCIITPRVRFGTSSADLVIKMLKSKLLGDEECLFEVRAK HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MRALVDDSLLSELKIEFLENVAFNLLYEEAKNLFGEVAARQLVYKIMKEASKSMVERFRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLLNVNDVTTALSLPCKAFGVAASCEREGDKLLVRVRECPLLKFDEDKSGRACITMMSL CCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHH VAGMVESVTGKRVCIITPRVRFGTSSADLVIKMLKSKLLGDEECLFEVRAK HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA