| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937008
Identifier: 156937008
GI number: 156937008
Start: 188552
End: 189037
Strand: Reverse
Name: 156937008
Synonym: Igni_0213
Alternate gene names: NA
Gene position: 189037-188552 (Counterclockwise)
Preceding gene: 156937009
Following gene: 156937006
Centisome position: 14.57
GC content: 52.67
Gene sequence:
>486_bases ATGAGCTCAGAGAAGTTGAACTTGACTGAACTTGAGAAGAAGGCACTCAAATTAATTATTGAGGCTGGAAAGGACGGCCT CCTCCAGCAAGACCTCTGGAAGAAGCTCAATATAGACAGTCGCGACGGCTCCAGAATAGCTCTTCGGCTCGCCAAGAAGA AGCTGATACATAGGGAGTTGGTCACCGTAAAGGGGAGGAAGACCTACAGGCTCACCGCCTTGGTAGACAAGGTACCGGAA GAGGAGGAGAGCGAGGAGAAGAAGGAAGTTAAGTATGAGAAGAGAATTCCTAGAAGCATCAAGCTGGACGTCAAGGTAAG GATGGGACTAGTCGCTAAGATCCCTTGTACCTCTTGTCCCCACGCCAACCGTTGCGGTCCCGGGAACTTCTTCGACCCCG CGACGTGCACCAAGCTGGGCCAGTGGCTCGAAAAGGCGGTCAAAGCACTGGAACGGAAAAGCGCCAAGAGAGCCACTCGC GTATGA
Upstream 100 bases:
>100_bases GATAAAGATATTCGAGGTGTCGAGGGAGGGCGAGGAGGGCGGCTCTGAAGAATGACTTAAATACCGTTGTTACTACAGAT AGCTACTGGGACAAAAAAGT
Downstream 100 bases:
>100_bases CCCTAGGCACCTCCGGCGTTTCCTCTGCGTGGTAGTGTAAGCGGAAGCCGCACCTCCTACACCTAGGCCCGTCCCATCCC AAGAGCGTGTCGTTCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSSEKLNLTELEKKALKLIIEAGKDGLLQQDLWKKLNIDSRDGSRIALRLAKKKLIHRELVTVKGRKTYRLTALVDKVPE EEESEEKKEVKYEKRIPRSIKLDVKVRMGLVAKIPCTSCPHANRCGPGNFFDPATCTKLGQWLEKAVKALERKSAKRATR V
Sequences:
>Translated_161_residues MSSEKLNLTELEKKALKLIIEAGKDGLLQQDLWKKLNIDSRDGSRIALRLAKKKLIHRELVTVKGRKTYRLTALVDKVPE EEESEEKKEVKYEKRIPRSIKLDVKVRMGLVAKIPCTSCPHANRCGPGNFFDPATCTKLGQWLEKAVKALERKSAKRATR V >Mature_160_residues SSEKLNLTELEKKALKLIIEAGKDGLLQQDLWKKLNIDSRDGSRIALRLAKKKLIHRELVTVKGRKTYRLTALVDKVPEE EESEEKKEVKYEKRIPRSIKLDVKVRMGLVAKIPCTSCPHANRCGPGNFFDPATCTKLGQWLEKAVKALERKSAKRATRV
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18336; Mature: 18205
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEKLNLTELEKKALKLIIEAGKDGLLQQDLWKKLNIDSRDGSRIALRLAKKKLIHREL CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VTVKGRKTYRLTALVDKVPEEEESEEKKEVKYEKRIPRSIKLDVKVRMGLVAKIPCTSCP HHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCC HANRCGPGNFFDPATCTKLGQWLEKAVKALERKSAKRATRV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSEKLNLTELEKKALKLIIEAGKDGLLQQDLWKKLNIDSRDGSRIALRLAKKKLIHREL CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VTVKGRKTYRLTALVDKVPEEEESEEKKEVKYEKRIPRSIKLDVKVRMGLVAKIPCTSCP HHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCC HANRCGPGNFFDPATCTKLGQWLEKAVKALERKSAKRATRV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA