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The map label for this gene is pdxT [H]

Identifier: 156936950

GI number: 156936950

Start: 140582

End: 141184

Strand: Reverse

Name: pdxT [H]

Synonym: Igni_0155

Alternate gene names: 156936950

Gene position: 141184-140582 (Counterclockwise)

Preceding gene: 156936951

Following gene: 156936949

Centisome position: 10.88

GC content: 57.38

Gene sequence:

>603_bases
GTGAGTGAGTTGAAGGTCGGCGTCTTGGCGCTTCAAGGCGGCGTGGTCGAACACATCTACATGATAAGGGAAGCCGCCAA
GAGGTTGGGCAAAGAAGTGGAAGTGGTGGAAGTTAGGAAGCCGGAGCACTTGAACTCCTTGAGGGCGATAGTGCTGCCCG
GAGGGGAAAGCACCGCCATGTACAAGTTAGGTAAGAGGACTGGCTTGGACAAGCGCCTCAAGGAGGCCCTCCTCGAGGGC
TTGCCGGCGCTCGGGACGTGCGCCGGCGCCGCACTGTTGGCGAGGGAGATAGAAGACAAGCAGAGCGGCAAGCGCTACGA
GCCCTTGTTGGGGGTCGCGGACTTTAAGGTAGTTAGGAACTTCTTTGGGAGGCAGAGGGAGAGCTTCGAGGCCAACTTGA
ACATAAAGGGAATAGGGACGTTCAGGGGAGTGTTCATAAGGGCCCCCGTGATGGTCCCCCTAAGCCCCGCCGTGGAGGTG
TTGGGCGAGTTCAAGGGGAACGCAGTGATGGTAAAGCAAGGCAACATAATAGCCACGTCCTTCCATCCCGAACTAACGAG
CGACACCAGGATTCATGAGATGTTGTTATCTGAGGCCTCGTGA

Upstream 100 bases:

>100_bases
GAGGCCGTACTCGAAGCGCAGTCCATGATAAGCGAGAGGAAGAGTATGATGGGCATTGACGTAAAACAGCTCAAGCCCGA
AGAGCTGTTGCAGGTTAGGG

Downstream 100 bases:

>100_bases
GCCCCGTCCATATAAGGTCAGCCTCGAGCACCCACACGTGGGGCCGGTGCCGCGCCTGCCCACACCTCTAATCGAAATGC
ACAGCGAGATAGAAGAGGCG

Product: SNO glutamine amidotransferase

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSELKVGVLALQGGVVEHIYMIREAAKRLGKEVEVVEVRKPEHLNSLRAIVLPGGESTAMYKLGKRTGLDKRLKEALLEG
LPALGTCAGAALLAREIEDKQSGKRYEPLLGVADFKVVRNFFGRQRESFEANLNIKGIGTFRGVFIRAPVMVPLSPAVEV
LGEFKGNAVMVKQGNIIATSFHPELTSDTRIHEMLLSEAS

Sequences:

>Translated_200_residues
MSELKVGVLALQGGVVEHIYMIREAAKRLGKEVEVVEVRKPEHLNSLRAIVLPGGESTAMYKLGKRTGLDKRLKEALLEG
LPALGTCAGAALLAREIEDKQSGKRYEPLLGVADFKVVRNFFGRQRESFEANLNIKGIGTFRGVFIRAPVMVPLSPAVEV
LGEFKGNAVMVKQGNIIATSFHPELTSDTRIHEMLLSEAS
>Mature_199_residues
SELKVGVLALQGGVVEHIYMIREAAKRLGKEVEVVEVRKPEHLNSLRAIVLPGGESTAMYKLGKRTGLDKRLKEALLEGL
PALGTCAGAALLAREIEDKQSGKRYEPLLGVADFKVVRNFFGRQRESFEANLNIKGIGTFRGVFIRAPVMVPLSPAVEVL
GEFKGNAVMVKQGNIIATSFHPELTSDTRIHEMLLSEAS

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=208, Percent_Identity=38.9423076923077, Blast_Score=115, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6323995, Length=215, Percent_Identity=36.2790697674419, Blast_Score=98, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6321048, Length=215, Percent_Identity=36.2790697674419, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21852; Mature: 21721

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELKVGVLALQGGVVEHIYMIREAAKRLGKEVEVVEVRKPEHLNSLRAIVLPGGESTAM
CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCEEEEEECCCCCHHH
YKLGKRTGLDKRLKEALLEGLPALGTCAGAALLAREIEDKQSGKRYEPLLGVADFKVVRN
HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FFGRQRESFEANLNIKGIGTFRGVFIRAPVMVPLSPAVEVLGEFKGNAVMVKQGNIIATS
HHCCCCCCCCCCCEEEECHHHCEEEEECCEEECCHHHHHHHHHCCCCEEEEECCCEEEEE
FHPELTSDTRIHEMLLSEAS
CCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SELKVGVLALQGGVVEHIYMIREAAKRLGKEVEVVEVRKPEHLNSLRAIVLPGGESTAM
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCEEEEEECCCCCHHH
YKLGKRTGLDKRLKEALLEGLPALGTCAGAALLAREIEDKQSGKRYEPLLGVADFKVVRN
HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FFGRQRESFEANLNIKGIGTFRGVFIRAPVMVPLSPAVEVLGEFKGNAVMVKQGNIIATS
HHCCCCCCCCCCCEEEECHHHCEEEEECCEEECCHHHHHHHHHCCCCEEEEECCCEEEEE
FHPELTSDTRIHEMLLSEAS
CCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA