Click here to switch to the map view.

The map label for this gene is spoJ [H]

Identifier: 15675946

GI number: 15675946

Start: 1851634

End: 1852440

Strand: Direct

Name: spoJ [H]

Synonym: SPy_2217

Alternate gene names: 15675946

Gene position: 1851634-1852440 (Clockwise)

Preceding gene: 15675945

Following gene: NA

Centisome position: 99.96

GC content: 35.81

Gene sequence:

>807_bases
ATGTTTCTTATTCTATCCAGGAACTCCCTTATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAA
TCCCTATCAGCCAAGGATACAATTTAATCAAAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTC
AACCTATTATTGTTCGAAAATCTGACATTTTTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATG
GCTGGTCTAAAAAAAGTTCCAGCTATCATCAAGAAGATCTCCACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTT
ACAACGTTCTAACCTTAACGCTATCGAAGAAGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATG
AGATTGCTAAATATATGGGAAAATCAAGACCTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATT
AAAGCAATTGAAGAAGGAAAAATTAGTGCGGGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTA
CCTCACTCATAAAATACAAAATGAAGGCCTAAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGC
TATCTAAAAAAACTAAAAATATTTTTGCCACTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATG
AAGCTGACAGCAAACCATAGTGGGTACCTTCAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCT
AAAGTAG

Upstream 100 bases:

>100_bases
AAATTAACAAAAACTACTCAAGATTTGACTAAAACGCAGTAAACAAGCTACCTAAATACTATTACATTTTATCACATAAA
ACAGTCCAAAGGACTGTTTT

Downstream 100 bases:

>100_bases
CTTGTTGATATTCTGTTTTTTCTTTTTTAGTTTTCCACATGAAAAATAGTTGAAAACAATAGCGGTGTCCCCTTAAAATG
GCTTTTCCACAGGTTGTGGA

Product: putative chromosome segregation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKM
AGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPII
KAIEEGKISAGHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
KLTANHSGYLQISFSNDDELNRIINKLK

Sequences:

>Translated_268_residues
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKM
AGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPII
KAIEEGKISAGHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
KLTANHSGYLQISFSNDDELNRIINKLK
>Mature_268_residues
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKM
AGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPII
KAIEEGKISAGHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
KLTANHSGYLQISFSNDDELNRIINKLK

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 30219; Mature: 30219

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRK
CEEEEECCCHHHHHHHHCCCHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEEC
SDIFGYELVAGERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKA
CCCCCCHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLS
HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEC
DDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLTANHSGYLQISFSNDDELNRIINKLK
EEEECCCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRK
CEEEEECCCHHHHHHHHCCCHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEEC
SDIFGYELVAGERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKA
CCCCCCHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLS
HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEC
DDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLTANHSGYLQISFSNDDELNRIINKLK
EEEECCCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]