Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is aspS
Identifier: 15675898
GI number: 15675898
Start: 1795501
End: 1797249
Strand: Reverse
Name: aspS
Synonym: SPy_2156
Alternate gene names: 15675898
Gene position: 1797249-1795501 (Counterclockwise)
Preceding gene: 15675899
Following gene: 15675897
Centisome position: 97.02
GC content: 42.14
Gene sequence:
>1749_bases ATGAAACGTAGCATGTATGCAGGGCGTGTTCGCGAAGAACACATTGGAACGACAATCACATTGAAAGGATGGGTCAGTCG TCGTCGTGACTTGGGTGGTCTCATCTTTATTGATTTGCGTGACCGTGAGGGTGTGATGCAATTAGTCATTAACCCTGAGG AAGTTTCCAGTGATGTGATGGCAACTGCTGAACGCTTACGTAGTGAATATGTGATTGAAGTGGAAGGTTTTGTTGAAGCT CGACAACAAGCCAATGATAAGTTGGCGACAGGAATGGTTGAGTTAAAAGTATCTGCTTTGACCATTTTAAACACAGCTAA AACGACGCCTTTTGAAATTAAAGATGACGTTGAAGTAAGTGATGACACGCGTTTACGTTACCGTTACTTAGATTTACGAC GTCCAGAAATGTTAGAAAACTTCAAGCTACGTGCAAAAGTGACTCATTCTATCCGTAATTACCTTGATGACCTTGAGTTT ATCGATGTCGAGACACCTATGTTGACAAAATCAACTCCAGAAGGTGCGCGTGACTATCTGGTACCAAGTCGTGTTAGCCA AGGGCATTTCTATGCTTTGCCACAAAGTCCGCAAATAACCAAACAGTTATTGATGAATGCTGGCTTTGATCGCTATTATC AAATTGTGAAATGTTTCCGCGATGAAGATCTACGTGGTGACCGTCAACCTGAGTTTACACAAGTTGACTTGGAAACGTCA TTCCTTTCTGAACAAGAAATTCAAGACATCGTTGAAGGCATGATTGCTAAAGTGATGAAAGAGACAAAAGAAATAGATGT AACCCTACCATTCCCACGTATGAGCTACGATGTAGCAATGAATAGCTACGGCTCTGATAAACCAGACACACGTTTTGAAA TGCTTTTACAAGACTTGACAGTAACTGTCAAAGGAAATGACTTCAAGGTTTTCTCAGAAGCACCAGCTGTCAAGGCGATT GTGGTGAAGGGAAATGCAGATCGATACTCTCGTAAAGATATTGACAAATTAACTGAGTTTGCCAAACAATTTGGTGCTAA AGGCCTTGCCTGGGTTAAGGTGACAGATGGTCAATTGGCAGGCCCAGTAGCCAAGTTCTTGACAGCTATTGAGACAGAGT TGTCAAGCCAATTAAAACTTGCTGAGAATGATTTGGTTTTATTTGTAGCGGATACTCTTGAGGTTGCTAATAATACATTA GGTGCCCTTCGTAATCGTATTGCCAAGGACCTTGACATGATTGATCAGTCGCAGTTTAATTTCCTTTGGGTGGTTGATTG GCCAATGTTTGAGTGGTCAGAAGAAGAAGGACGTTATATGTCAGCTCATCACCCCTTCACTCTTCCAACGCCAGAATCTG CTCATGAGTTAGAGGGTGATTTGGCTAAGGTACGGGCTATTGCTTACGACATCGTTTTAAATGGTTACGAGCTTGGTGGT GGTAGCCTGCGTATCAATCAAAAAGAGATGCAAGAGCGCATGTTCAAGGCTCTTGGCTTTACCGCTGATGAAGCTAACGA CCAATTTGGTTTCTTACTAGAAGCGATGGACTACGGCTTTCCTCCTCATGGTGGCTTGGCAATTGGTCTTGACCGTTTTG TCATGTTGCTTGCTGGAAAAGACAATATTCGAGAAGTTATTGCCTTCCCTAAAAATAACAAAGCCTCTGATCCAATGACG CAAGCACCTAGTCTTGTTTCTGAAAACCAATTAGAAGAACTCAGTCTTCAAATAGAAAGTCATGATTAA
Upstream 100 bases:
>100_bases TTGCTATAATAGTAGGGAATGAATTAATTGATTTATATAGTGAAAGGAATTGGAAACGAGCAGGTTTCACAGGATTCTGT TTGTTTTAGGGAATTTATTT
Downstream 100 bases:
>100_bases GAAAACAACCTATAAGAAAAAAGTTAAATATGTCATTAGTAGAGGGGCCAAGAAAGTTGGCCTACTCCACGCTCTAAGAA GTATTTCAAGAGAAAAATAT
Product: aspartyl-tRNA synthetase
Products: NA
Alternate protein names: Aspartate--tRNA ligase; AspRS
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMATAERLRSEYVIEVEGFVEA RQQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEF IDVETPMLTKSTPEGARDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS FLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQDLTVTVKGNDFKVFSEAPAVKAI VVKGNADRYSRKDIDKLTEFAKQFGAKGLAWVKVTDGQLAGPVAKFLTAIETELSSQLKLAENDLVLFVADTLEVANNTL GALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAIAYDIVLNGYELGG GSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMT QAPSLVSENQLEELSLQIESHD
Sequences:
>Translated_582_residues MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMATAERLRSEYVIEVEGFVEA RQQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEF IDVETPMLTKSTPEGARDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS FLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQDLTVTVKGNDFKVFSEAPAVKAI VVKGNADRYSRKDIDKLTEFAKQFGAKGLAWVKVTDGQLAGPVAKFLTAIETELSSQLKLAENDLVLFVADTLEVANNTL GALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAIAYDIVLNGYELGG GSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMT QAPSLVSENQLEELSLQIESHD >Mature_582_residues MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMATAERLRSEYVIEVEGFVEA RQQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEF IDVETPMLTKSTPEGARDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS FLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQDLTVTVKGNDFKVFSEAPAVKAI VVKGNADRYSRKDIDKLTEFAKQFGAKGLAWVKVTDGQLAGPVAKFLTAIETELSSQLKLAENDLVLFVADTLEVANNTL GALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAIAYDIVLNGYELGG GSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMT QAPSLVSENQLEELSLQIESHD
Specific function: Unknown
COG id: COG0173
COG function: function code J; Aspartyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI40789249, Length=592, Percent_Identity=40.3716216216216, Blast_Score=424, Evalue=1e-119, Organism=Homo sapiens, GI5031815, Length=285, Percent_Identity=27.0175438596491, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI194272210, Length=285, Percent_Identity=27.0175438596491, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI45439306, Length=275, Percent_Identity=26.9090909090909, Blast_Score=87, Evalue=4e-17, Organism=Escherichia coli, GI1788173, Length=590, Percent_Identity=49.3220338983051, Blast_Score=565, Evalue=1e-162, Organism=Escherichia coli, GI1789256, Length=294, Percent_Identity=25.5102040816327, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790571, Length=295, Percent_Identity=24.406779661017, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI32566633, Length=589, Percent_Identity=35.9932088285229, Blast_Score=322, Evalue=5e-88, Organism=Caenorhabditis elegans, GI71994340, Length=310, Percent_Identity=22.9032258064516, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17535925, Length=308, Percent_Identity=23.0519480519481, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17535927, Length=310, Percent_Identity=22.9032258064516, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17551876, Length=264, Percent_Identity=25.3787878787879, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71984122, Length=302, Percent_Identity=24.8344370860927, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325153, Length=625, Percent_Identity=32.32, Blast_Score=285, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6323011, Length=241, Percent_Identity=28.6307053941909, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320242, Length=256, Percent_Identity=26.171875, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321807, Length=267, Percent_Identity=24.3445692883895, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24584738, Length=600, Percent_Identity=36, Blast_Score=349, Evalue=3e-96, Organism=Drosophila melanogaster, GI17136276, Length=239, Percent_Identity=28.4518828451883, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24640851, Length=279, Percent_Identity=27.2401433691756, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640849, Length=278, Percent_Identity=26.2589928057554, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYD_STRP1 (Q99XL0)
Other databases:
- EMBL: AE004092 - EMBL: CP000017 - RefSeq: NP_270072.1 - RefSeq: YP_283176.1 - ProteinModelPortal: Q99XL0 - SMR: Q99XL0 - EnsemblBacteria: EBSTRT00000001462 - EnsemblBacteria: EBSTRT00000028068 - GeneID: 3571061 - GeneID: 901791 - GenomeReviews: AE004092_GR - GenomeReviews: CP000017_GR - KEGG: spy:SPy_2156 - KEGG: spz:M5005_Spy_1813 - GeneTree: EBGT00050000027607 - HOGENOM: HBG396032 - OMA: AFPKTQQ - ProtClustDB: PRK00476 - BioCyc: SPYO160490:SPY2156-MONOMER - BioCyc: SPYO293653:M5005_SPY1813-MONOMER - GO: GO:0005737 - HAMAP: MF_00044_B - InterPro: IPR004364 - InterPro: IPR018150 - InterPro: IPR006195 - InterPro: IPR020564 - InterPro: IPR004524 - InterPro: IPR018153 - InterPro: IPR002312 - InterPro: IPR004115 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004365 - Gene3D: G3DSA:3.30.1360.30 - Gene3D: G3DSA:2.40.50.140 - PANTHER: PTHR22594 - PANTHER: PTHR22594:SF5 - PRINTS: PR01042 - TIGRFAMs: TIGR00459
Pfam domain/function: PF02938 GAD; PF00152 tRNA-synt_2; PF01336 tRNA_anti; SSF50249 Nucleic_acid_OB
EC number: =6.1.1.12
Molecular weight: Translated: 66029; Mature: 66029
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM CCCCCCCCCCHHHHCCCEEEEHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHH ATAERLRSEYVIEVEGFVEARQQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS HHHHHHCCCEEEEEHHHHHHHHHCCHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCCCCC DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL CCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCC VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS CCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHH FLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQDLT HCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHCE VTVKGNDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWVKVTDGQLA EEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH GPVAKFLTAIETELSSQLKLAENDLVLFVADTLEVANNTLGALRNRIAKDLDMIDQSQFN HHHHHHHHHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAIAYDIVLNGYELGG EEEEEECCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHHHEEEEEECEEECC GSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGK CEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECHHHHEEEECCC DNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESHD CCHHHHHCCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCC >Mature Secondary Structure MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM CCCCCCCCCCHHHHCCCEEEEHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHH ATAERLRSEYVIEVEGFVEARQQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS HHHHHHCCCEEEEEHHHHHHHHHCCHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCCCCC DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL CCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCC VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS CCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHH FLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQDLT HCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHCE VTVKGNDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWVKVTDGQLA EEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH GPVAKFLTAIETELSSQLKLAENDLVLFVADTLEVANNTLGALRNRIAKDLDMIDQSQFN HHHHHHHHHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAIAYDIVLNGYELGG EEEEEECCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHHHEEEEEECEEECC GSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGK CEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECHHHHEEEECCC DNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESHD CCHHHHHCCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11296296