Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is ymfK [C]
Identifier: 15675873
GI number: 15675873
Start: 1775862
End: 1776629
Strand: Reverse
Name: ymfK [C]
Synonym: SPy_2125
Alternate gene names: 15675873
Gene position: 1776629-1775862 (Counterclockwise)
Preceding gene: 15675890
Following gene: 15675872
Centisome position: 95.91
GC content: 36.07
Gene sequence:
>768_bases ATGGCTAAAAATAGTCCCCAAGATTTAATAAATAGAGAAATTTTCTCAACAAATCTCAACATGCTTATGGCTAAAAAGAA TATCAAACAGATAGATATTCACAACAAACTAGGAATACCTAAGAGTACGATAACTGGCTATGTTAAAGGTCGTTCACTCC CAACTGCTGGAAACGTTCAAAAGCTGGCGGACTTCTTCGGAGTTCTAAAATCAGACATTGACCCCCGTTTTGATTCTAAT AATATTGAAACAAATAGTAATATTATCCCATCAACCCTACAAAAAGTAACATCTACTTTATCTCAGCTAGAACACAAGCG ACAATTAAACGTCCTTGATTATGCTGAAACACAATTAGAACAACAAAACACAGTAGAAGAACCACAAGCCACCTACTACA CTTACAATTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGATGTACAAGTAGAAACAATTGAATTA CCAGTCGATTACGACGCTGATTTTGTCATACCGGTTTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGT ATTTATCAAACTATCTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCAAACAAC TTGTTATAAACGATTCTGGAGCATTTCTGCATAGTCTGAACGACAAGTATGACGATATACTCATAGATAGAGATAGTGAT TTCCGTATTATCGGAGAAGTTATTGGGAGTTTTACATCTAAATCATGA
Upstream 100 bases:
>100_bases CCAAGTCAATGATTTTTGTAGAAAAATATTAAAAAAATAGTACTTTTAGGTTTATTTGTGTTAGAATTAATTCAGATACA AAAAGAAAGGGGTAAGAGAA
Downstream 100 bases:
>100_bases CTATCTGATACCCACGCGCCGAATTCCACTATTTTCCACTAATTTTGGTTGCTTTACCTTTAAGGACTCGCATTTTGCTC TTTAAGACAGCCGAAAAGTC
Product: putative repressor protein
Products: NA
Alternate protein names: Transcriptional Regulator; Phage Repressor-Like Protein; Phage Repressor; Repressor; XRE Family Transcriptional Regulator; CI Repressor; Prophage; Phage Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Bifunctional; Repressor-Like Protein; Helix-Turn-Helix Domain-Containing Protein; LexA Repressor; Prophage Repressor; Transcriptional Repressor
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD FRIIGEVIGSFTSKS
Sequences:
>Translated_255_residues MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD FRIIGEVIGSFTSKS >Mature_254_residues AKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSNN IETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIELP VDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSDF RIIGEVIGSFTSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28725; Mature: 28594
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQ CCCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCHHHHEEEEECCCCCCCCCHH KLADFFGVLKSDIDPRFDSNNIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIELPVDYDADFVIPVYGDSMEPE HHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCC YHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD CCCCCEEEEEEEEEECCCCEEEEEHHHHHHEEEEEECCCCHHHHHCCCCCCEEEEECCCC FRIIGEVIGSFTSKS HHHHHHHHHHHCCCC >Mature Secondary Structure AKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQ CCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCHHHHEEEEECCCCCCCCCHH KLADFFGVLKSDIDPRFDSNNIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIELPVDYDADFVIPVYGDSMEPE HHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCC YHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD CCCCCEEEEEEEEEECCCCEEEEEHHHHHHEEEEEECCCCHHHHHCCCCCCEEEEECCCC FRIIGEVIGSFTSKS HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA