Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is int4 [H]
Identifier: 15675872
GI number: 15675872
Start: 1773458
End: 1774603
Strand: Reverse
Name: int4 [H]
Synonym: SPy_2122
Alternate gene names: 15675872
Gene position: 1774603-1773458 (Counterclockwise)
Preceding gene: 15675873
Following gene: 15675871
Centisome position: 95.8
GC content: 35.95
Gene sequence:
>1146_bases ATGAAAATAACAGAACATAAGAAGAAAAACGGTACAATCGTTTATCGTGCTAGTATTTATCTAGGCATTGACCAAATGAC AGGTAAGAGAGTAAAAACAAGCATCACAGGAAGAACAAGAAAAGAAGTTAATCAAAAAGCCAAGCACGCGCAGTTTGACT TCCTATCTAATGGATCTACAATTAAAAGAAAAGTTGTGATTAAAACATTTAAAGAACTTAGTCATTTATGGCTTGAAACC TATAAGTTAACAGTAAAGCCTCAAACTTATGATGCTACTGTTACTAGACTTAATCGACATATTATGCCAACTCTGGGCAA TATGAAGGTTGATAAGATAACCGCTAGTGATATTCAAATGCTGATTAATAGATTATCTAAATATTACGTCAATTATACTG CGGTACGTTCAGTCATCCGAAAAGTTCTCCAACAAGGAGTATTGCTAGGGCTAATAGATTATAACTCAGCAAGAGATATT ATCCTTCCAAGGAAGCAGCCAAACGCTAAGAAAAAAGTTAAGTTTATTGATCCGTCTGATTTGAAATCTTTTTTAGAACA TTTAGAAACTAGTCAACACAAACGCTATAACCTTTACTTTGATGCAGTTCTCTACCAACTTTTATTATCCACTGGCTTGA GGATAGGCGAAGCCTGTGCATTAGAGTGGGGAGATATTGACCTAGAAAATGGTACAATAGCCATTAATAAGACTTACAAT AAAAATTTGAAGTTTTTGAGTACAGCTAAAACCCAGTCAGGCAATAGAGTGATTAGTGTTGATAAAAAGACCCTTAGAAG CCTAAAGCTCTATCAAATGAGACAGCGACAATTATTTAATGAGGTTGGTGCGCGTGTGTCGGAGGTAGTGTTTGCCACAC CAACACGAAAGTATTTTAATGCTTCGGTTAGACAAAGCGCTTTAGATACTAGGTGTAAGGAAGCAGGGATTGAACGCTTT ACCTTTCACGCTTTTAGACACACTCACGCTAGTTTATTGCTGAACGCTGGTATTAGTTATAAGGAACTTCAGTACCGTCT AGGACATGCGAATATCAGCATGACTTTGGATACCTATGGCCATCTTTCTAAGGGCAAAGAAAAAGAAGCTGTTTTATATT ATGAAAAGGCTATGAATAATTTATAA
Upstream 100 bases:
>100_bases TATTTCGGATATTTACCCGATACCATTATTATACCATGATATGAACTAATCTAAAACCCTTTTAATAATAGCTTGCCTGC TGATGGAAAGGTTTATGATC
Downstream 100 bases:
>100_bases GTCCACAAAAAAGTCCACAAATTAATATTTTGAGAGGTGTAAACCTAATGAAACCTTGTTATATCAACGTTTAGAAAGTG TTAAAAACAAAATTATGACA
Product: putative integrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL
Sequences:
>Translated_381_residues MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL >Mature_381_residues MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL
Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'phage' integrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011010 - InterPro: IPR013762 - InterPro: IPR002104 - InterPro: IPR023109 [H]
Pfam domain/function: PF00589 Phage_integrase [H]
EC number: NA
Molecular weight: Translated: 43812; Mature: 43812
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGST CCCCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCH IKRKVVIKTFKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQM HHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSD HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEEEECHHH LKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCEEEEEECCC KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFN CCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHHHHH ASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCC HLSKGKEKEAVLYYEKAMNNL CCCCCCCCCCEEEEHHHHCCC >Mature Secondary Structure MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGST CCCCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCH IKRKVVIKTFKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQM HHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSD HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEEEECHHH LKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCEEEEEECCC KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFN CCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHHHHH ASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCC HLSKGKEKEAVLYYEKAMNNL CCCCCCCCCCEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]