Definition Streptococcus pyogenes M1 GAS chromosome, complete genome.
Accession NC_002737
Length 1,852,441

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The map label for this gene is int4 [H]

Identifier: 15675872

GI number: 15675872

Start: 1773458

End: 1774603

Strand: Reverse

Name: int4 [H]

Synonym: SPy_2122

Alternate gene names: 15675872

Gene position: 1774603-1773458 (Counterclockwise)

Preceding gene: 15675873

Following gene: 15675871

Centisome position: 95.8

GC content: 35.95

Gene sequence:

>1146_bases
ATGAAAATAACAGAACATAAGAAGAAAAACGGTACAATCGTTTATCGTGCTAGTATTTATCTAGGCATTGACCAAATGAC
AGGTAAGAGAGTAAAAACAAGCATCACAGGAAGAACAAGAAAAGAAGTTAATCAAAAAGCCAAGCACGCGCAGTTTGACT
TCCTATCTAATGGATCTACAATTAAAAGAAAAGTTGTGATTAAAACATTTAAAGAACTTAGTCATTTATGGCTTGAAACC
TATAAGTTAACAGTAAAGCCTCAAACTTATGATGCTACTGTTACTAGACTTAATCGACATATTATGCCAACTCTGGGCAA
TATGAAGGTTGATAAGATAACCGCTAGTGATATTCAAATGCTGATTAATAGATTATCTAAATATTACGTCAATTATACTG
CGGTACGTTCAGTCATCCGAAAAGTTCTCCAACAAGGAGTATTGCTAGGGCTAATAGATTATAACTCAGCAAGAGATATT
ATCCTTCCAAGGAAGCAGCCAAACGCTAAGAAAAAAGTTAAGTTTATTGATCCGTCTGATTTGAAATCTTTTTTAGAACA
TTTAGAAACTAGTCAACACAAACGCTATAACCTTTACTTTGATGCAGTTCTCTACCAACTTTTATTATCCACTGGCTTGA
GGATAGGCGAAGCCTGTGCATTAGAGTGGGGAGATATTGACCTAGAAAATGGTACAATAGCCATTAATAAGACTTACAAT
AAAAATTTGAAGTTTTTGAGTACAGCTAAAACCCAGTCAGGCAATAGAGTGATTAGTGTTGATAAAAAGACCCTTAGAAG
CCTAAAGCTCTATCAAATGAGACAGCGACAATTATTTAATGAGGTTGGTGCGCGTGTGTCGGAGGTAGTGTTTGCCACAC
CAACACGAAAGTATTTTAATGCTTCGGTTAGACAAAGCGCTTTAGATACTAGGTGTAAGGAAGCAGGGATTGAACGCTTT
ACCTTTCACGCTTTTAGACACACTCACGCTAGTTTATTGCTGAACGCTGGTATTAGTTATAAGGAACTTCAGTACCGTCT
AGGACATGCGAATATCAGCATGACTTTGGATACCTATGGCCATCTTTCTAAGGGCAAAGAAAAAGAAGCTGTTTTATATT
ATGAAAAGGCTATGAATAATTTATAA

Upstream 100 bases:

>100_bases
TATTTCGGATATTTACCCGATACCATTATTATACCATGATATGAACTAATCTAAAACCCTTTTAATAATAGCTTGCCTGC
TGATGGAAAGGTTTATGATC

Downstream 100 bases:

>100_bases
GTCCACAAAAAAGTCCACAAATTAATATTTTGAGAGGTGTAAACCTAATGAAACCTTGTTATATCAACGTTTAGAAAGTG
TTAAAAACAAAATTATGACA

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET
YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI
ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN
KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF
TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL

Sequences:

>Translated_381_residues
MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET
YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI
ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN
KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF
TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL
>Mature_381_residues
MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLET
YKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDI
ILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN
KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQSALDTRCKEAGIERF
TFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKGKEKEAVLYYEKAMNNL

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43812; Mature: 43812

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGST
CCCCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCH
IKRKVVIKTFKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQM
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHH
LINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEEEECHHH
LKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCEEEEEECCC
KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFN
CCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHHHHH
ASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCC
HLSKGKEKEAVLYYEKAMNNL
CCCCCCCCCCEEEEHHHHCCC
>Mature Secondary Structure
MKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQFDFLSNGST
CCCCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCH
IKRKVVIKTFKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQM
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHH
LINRLSKYYVNYTAVRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEEEECHHH
LKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYN
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCEEEEEECCC
KNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFN
CCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHHHHH
ASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCC
HLSKGKEKEAVLYYEKAMNNL
CCCCCCCCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]