Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is recA [H]
Identifier: 15675866
GI number: 15675866
Start: 1766417
End: 1767553
Strand: Reverse
Name: recA [H]
Synonym: SPy_2116
Alternate gene names: 15675866
Gene position: 1767553-1766417 (Counterclockwise)
Preceding gene: 15675867
Following gene: 15675865
Centisome position: 95.42
GC content: 40.72
Gene sequence:
>1137_bases TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT GAAAAATATTGAAAAAGATTTTGGTAAGGGTGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA AATGCTAAGCGTTATTTGGCCGATCACCCAGAATTGTTTGATGAAATCGACCTTAAAGTACGTGTTAAATTTGGTTTGCT TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA TTGAAATTGAAGATTAA
Upstream 100 bases:
>100_bases AATTTGCTATAATGTTATTTAGTAGCTATAGTAGGATATGGTTTACAATTATGTAGATTAATCCTGCTGACGATGGTTTG TTAAAAAAGAGGAGAAAGTA
Downstream 100 bases:
>100_bases AAAGAGCCCTTCAGGGCTTTTTAAAATGTATTTTTAAAGGTTAGTAGGACTACTGTTCATAGGTGTGTGGGTGAATAGAA ACCATCATTTAAAAAGATGT
Product: recombinase A
Products: NA
Alternate protein names: Recombinase A [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE NAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Sequences:
>Translated_378_residues MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE NAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED >Mature_377_residues AKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGPE SSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAA LVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGT TQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSEN AKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation
COG id: COG0468
COG function: function code L; RecA/RadA recombinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recA family [H]
Homologues:
Organism=Escherichia coli, GI1789051, Length=325, Percent_Identity=62.7692307692308, Blast_Score=415, Evalue=1e-117,
Paralogues:
None
Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR013765 - InterPro: IPR020584 - InterPro: IPR020588 - InterPro: IPR020587 [H]
Pfam domain/function: PF00154 RecA [H]
EC number: NA
Molecular weight: Translated: 40590; Mature: 40458
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLAL CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE DIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL EEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHH GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ CCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHCCCCCCCCCCCHH ARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEECC TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDI CEEECCCCCCCCCCCCCHHEEEEEHHCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHH IQKAGAWFSYNGEKIGQGSENAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVAS HHHCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCEEEEEEEECCCCCCCCCCEEEEC EETDDLALDLDNGIEIED CCCCCEEEECCCCCEECC >Mature Secondary Structure AKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLAL CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE DIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL EEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHH GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ CCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHCCCCCCCCCCCHH ARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEECC TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDI CEEECCCCCCCCCCCCCHHEEEEEHHCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHH IQKAGAWFSYNGEKIGQGSENAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVAS HHHCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCEEEEEEEECCCCCCCCCCEEEEC EETDDLALDLDNGIEIED CCCCCEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA