Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is vanYB [H]
Identifier: 15675610
GI number: 15675610
Start: 1461651
End: 1462394
Strand: Reverse
Name: vanYB [H]
Synonym: SPy_1765
Alternate gene names: 15675610
Gene position: 1462394-1461651 (Counterclockwise)
Preceding gene: 15675611
Following gene: 15675609
Centisome position: 78.94
GC content: 39.65
Gene sequence:
>744_bases ATGAAATATAATTCGTTAAACTATTTAGTGCAATTGCTAATTGTTATTGTTTTTTTAGGAGGGCTTTACCTCTTTATAAA ACCAGAAGAGTCAGTAACACCAACTCAGTTGAATAAAAAAGAAATCCAACAAAAAGATATCAAAAAAACGGACCGTTTAC GAGCTTTACCTAAGGTATCTGTTGAAGATTGGGAGTTGGTTTTAGTAAACCGCGATCACATTACAAAAGAAATGAGTCCT GAATTAGCTGACATTAATGGTATTTCTGTGGATAAACGCATTGAGCAAGCCACTAGTGACTTTTTAGCAGCAGCACAAGC TATCGACTTGCAAGAACATCTTATCTCTGGGTACCGTTCCGTAGACTACCAAACAGAGCTTTACCAATCTTATATTAAAA AAGAGATGGCTAACGATCCAACATTGACACAAGAAGCTGCGGAGGCTTTGGTGCAAACCTATTCACAGCCGCCAGGGGCT AGTGAACATCACACTGGTCTTGCTATTGACATGAGCACTGTAGATACTTTAAATGCCAGTGATCCATCAGTAGCTAAAGC AGTTCAAAAAATTGCACCTGATTATGGGTTTGTCTTGCGCTTTCCAGAAGGAAAAAAGACTAGTACAGGGGTTGATTATG AGGATTGGCATTACCGCTATGTAGGCAAGGCGTCTGCTCGTTATATGGCTCAGCACAACCTAACGTTGGAAGAGTACATT GCTGCTTTAAAGGAGAAACGATGA
Upstream 100 bases:
>100_bases GTTACAGTTGTTGAATTTGATGATGGCCAATTTACGATAAAGACTATTGGAGATATGAGTTACCGCTACCGCGGTCGTGA AATAATAGAAGAACGGTCAG
Downstream 100 bases:
>100_bases GAAAACGACTAAAGTTTCCGTATTTTTTAACGCTTCTAGCTTGCTTTTTATTGCTGATTGTTTGTCCCTTACTGAGTAGC CAAAGGATAGCTAGTGCAGA
Product: putative D,D-carboxypeptidase
Products: NA
Alternate protein names: DD-carboxypeptidase; DD-peptidase [H]
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKYNSLNYLVQLLIVIVFLGGLYLFIKPEESVTPTQLNKKEIQQKDIKKTDRLRALPKVSVEDWELVLVNRDHITKEMSP ELADINGISVDKRIEQATSDFLAAAQAIDLQEHLISGYRSVDYQTELYQSYIKKEMANDPTLTQEAAEALVQTYSQPPGA SEHHTGLAIDMSTVDTLNASDPSVAKAVQKIAPDYGFVLRFPEGKKTSTGVDYEDWHYRYVGKASARYMAQHNLTLEEYI AALKEKR
Sequences:
>Translated_247_residues MKYNSLNYLVQLLIVIVFLGGLYLFIKPEESVTPTQLNKKEIQQKDIKKTDRLRALPKVSVEDWELVLVNRDHITKEMSP ELADINGISVDKRIEQATSDFLAAAQAIDLQEHLISGYRSVDYQTELYQSYIKKEMANDPTLTQEAAEALVQTYSQPPGA SEHHTGLAIDMSTVDTLNASDPSVAKAVQKIAPDYGFVLRFPEGKKTSTGVDYEDWHYRYVGKASARYMAQHNLTLEEYI AALKEKR >Mature_247_residues MKYNSLNYLVQLLIVIVFLGGLYLFIKPEESVTPTQLNKKEIQQKDIKKTDRLRALPKVSVEDWELVLVNRDHITKEMSP ELADINGISVDKRIEQATSDFLAAAQAIDLQEHLISGYRSVDYQTELYQSYIKKEMANDPTLTQEAAEALVQTYSQPPGA SEHHTGLAIDMSTVDTLNASDPSVAKAVQKIAPDYGFVLRFPEGKKTSTGVDYEDWHYRYVGKASARYMAQHNLTLEEYI AALKEKR
Specific function: Vancomycin-inducible, penicillin-resistant, DD- carboxypeptidase that hydrolyzes depsipeptide- and D-alanyl-D- alanine-containing peptidoglycan precursors. Insensitive to beta- lactams [H]
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M15B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009045 - InterPro: IPR003709 [H]
Pfam domain/function: PF02557 VanY [H]
EC number: =3.4.16.4 [H]
Molecular weight: Translated: 27959; Mature: 27959
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNSLNYLVQLLIVIVFLGGLYLFIKPEESVTPTQLNKKEIQQKDIKKTDRLRALPKVS CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VEDWELVLVNRDHITKEMSPELADINGISVDKRIEQATSDFLAAAQAIDLQEHLISGYRS CCCEEEEEECCHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDYQTELYQSYIKKEMANDPTLTQEAAEALVQTYSQPPGASEHHTGLAIDMSTVDTLNAS CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHCCCCCC DPSVAKAVQKIAPDYGFVLRFPEGKKTSTGVDYEDWHYRYVGKASARYMAQHNLTLEEYI CHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHH AALKEKR HHHHCCC >Mature Secondary Structure MKYNSLNYLVQLLIVIVFLGGLYLFIKPEESVTPTQLNKKEIQQKDIKKTDRLRALPKVS CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VEDWELVLVNRDHITKEMSPELADINGISVDKRIEQATSDFLAAAQAIDLQEHLISGYRS CCCEEEEEECCHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDYQTELYQSYIKKEMANDPTLTQEAAEALVQTYSQPPGASEHHTGLAIDMSTVDTLNAS CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHCCCCCC DPSVAKAVQKIAPDYGFVLRFPEGKKTSTGVDYEDWHYRYVGKASARYMAQHNLTLEEYI CHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHH AALKEKR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8631706; 12663927 [H]