Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is lytG [H]
Identifier: 15675609
GI number: 15675609
Start: 1461085
End: 1461654
Strand: Reverse
Name: lytG [H]
Synonym: SPy_1764
Alternate gene names: 15675609
Gene position: 1461654-1461085 (Counterclockwise)
Preceding gene: 15675610
Following gene: 15675608
Centisome position: 78.9
GC content: 35.09
Gene sequence:
>570_bases ATGAGAAAACGACTAAAGTTTCCGTATTTTTTAACGCTTCTAGCTTGCTTTTTATTGCTGATTGTTTGTCCCTTACTGAG TAGCCAAAGGATAGCTAGTGCAGATAAAGAAGTAAGGGTGAACTACAGCCAAAAACAATTTATTACAAAAATGGGTAAAG AAGTTAAACCATTGGCAAAATATTATGGCATTAGACCATCTATTTTGATTGCTCAAATTCTTTTGGAAACCCATGATGGA AAAACATTACTAGCGTCTAAGTATCATAATCTTTTTAGCAAGAAAGCAACTCCAGGACAAGTGGCCATTACCCTAAAGTC CCCTAAACAAACCAACCAAAACGTGAGATATGCTATTTATAAAGATGACGCTAGTGCAATTAGAGATTATTTACGAATGC TTCGGCAGGGAAAAGAAGTCGATAAGCGTTTGTATCGTAATCTTGCTACAGAAAAAGGGTATAAAGCACCAGCTAAAAGT TTACAAAAGTATTTGCATTATACTGATAAAACCTATGCTAGGCGACTAATTCAGGTCATTGAAAGTAACGATTTAACAAA CTATGACTGA
Upstream 100 bases:
>100_bases AGGATTGGCATTACCGCTATGTAGGCAAGGCGTCTGCTCGTTATATGGCTCAGCACAACCTAACGTTGGAAGAGTACATT GCTGCTTTAAAGGAGAAACG
Downstream 100 bases:
>100_bases AATTAGCGCTCTTTATAAAAGAGTGCTAATTTTTTTGAGTTTTTTTCTTGACATGTCTCCCATAAAGAGTATAATAGAAT TATAAATTAGCAGTCTACTA
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Autolysin lytG; Exo-beta-N-acetylglucosaminidase lytG; Peptidoglycan hydrolase lytG [H]
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRKRLKFPYFLTLLACFLLLIVCPLLSSQRIASADKEVRVNYSQKQFITKMGKEVKPLAKYYGIRPSILIAQILLETHDG KTLLASKYHNLFSKKATPGQVAITLKSPKQTNQNVRYAIYKDDASAIRDYLRMLRQGKEVDKRLYRNLATEKGYKAPAKS LQKYLHYTDKTYARRLIQVIESNDLTNYD
Sequences:
>Translated_189_residues MRKRLKFPYFLTLLACFLLLIVCPLLSSQRIASADKEVRVNYSQKQFITKMGKEVKPLAKYYGIRPSILIAQILLETHDG KTLLASKYHNLFSKKATPGQVAITLKSPKQTNQNVRYAIYKDDASAIRDYLRMLRQGKEVDKRLYRNLATEKGYKAPAKS LQKYLHYTDKTYARRLIQVIESNDLTNYD >Mature_189_residues MRKRLKFPYFLTLLACFLLLIVCPLLSSQRIASADKEVRVNYSQKQFITKMGKEVKPLAKYYGIRPSILIAQILLETHDG KTLLASKYHNLFSKKATPGQVAITLKSPKQTNQNVRYAIYKDDASAIRDYLRMLRQGKEVDKRLYRNLATEKGYKAPAKS LQKYLHYTDKTYARRLIQVIESNDLTNYD
Specific function: Is the major glucosaminidase responsible for peptidoglycan structural determination during vegetative growth. Acts processively from the ends of the glycan strands. Also plays a role in motility, chemotaxis and cell division [H]
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 73 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000423 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 21929; Mature: 21929
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRLKFPYFLTLLACFLLLIVCPLLSSQRIASADKEVRVNYSQKQFITKMGKEVKPLAK CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHCHHHHHHHH YYGIRPSILIAQILLETHDGKTLLASKYHNLFSKKATPGQVAITLKSPKQTNQNVRYAIY HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEE KDDASAIRDYLRMLRQGKEVDKRLYRNLATEKGYKAPAKSLQKYLHYTDKTYARRLIQVI ECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH ESNDLTNYD HCCCCCCCC >Mature Secondary Structure MRKRLKFPYFLTLLACFLLLIVCPLLSSQRIASADKEVRVNYSQKQFITKMGKEVKPLAK CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHCHHHHHHHH YYGIRPSILIAQILLETHDGKTLLASKYHNLFSKKATPGQVAITLKSPKQTNQNVRYAIY HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEE KDDASAIRDYLRMLRQGKEVDKRLYRNLATEKGYKAPAKSLQKYLHYTDKTYARRLIQVI ECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH ESNDLTNYD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]