Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ydiB [H]
Identifier: 15675584
GI number: 15675584
Start: 1436384
End: 1436845
Strand: Reverse
Name: ydiB [H]
Synonym: SPy_1735
Alternate gene names: 15675584
Gene position: 1436845-1436384 (Counterclockwise)
Preceding gene: 15675585
Following gene: 15675583
Centisome position: 77.56
GC content: 37.66
Gene sequence:
>462_bases ATGTTTTATAGTGAAAATGAATATACTCTTAAAGCTTACGGAGAAACCCTAGGTACTTATTTGTCTATTGGAGATGTGAT TGTATTGTCTGGCGACTTAGGTGCCGGTAAAACAACATTGGCAAAAGGTATTGCTAAAGGGATGGGGATTAGTCAAATGA TCAAAAGCCCAACTTATACTATTGTTAGAGAATATGAAGGACGTCTACCTCTTTATCACTTAGATATTTACCGTGTTGGT GATGATCCAGACTCTATTGATTTAGATGATTTTCTTTTTGGTAATGGTGTTACCGTTATTGAGTGGGGAGAATTATTAGG AGAGGGATTATTACAAGACTATTTGCAAATTACCATTACTAAACGAGACAAAGGTCGTCAACTAGACTTGTTAGCGCATG GTGAGCGCTCTCGTCAGCTTCTGGAGATAATGTCACATGGTTCAGCAAAGTCTCGTTATTGA
Upstream 100 bases:
>100_bases CCTTTAATATAAAGAAGCGTTTTTACTTTACGAATACCTTATTGGAGTCATCTTCTAGGTAGTGCTTGGAAGTATGTTTT TTTTCTGATATAATGTTGCT
Downstream 100 bases:
>100_bases AGAAGGCGTACCTCAAGATGCAAAAGCTGTACTTTCCTTAGTGACGGCAGCTGCCAAAGAAACAGATTTTATAACAGGCG TAGAGACTATATTAGAGGCT
Product: ATP/GTP hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY
Sequences:
>Translated_153_residues MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY >Mature_153_residues MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY
Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=119, Percent_Identity=36.1344537815126, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17043; Mature: 17043
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYT CCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE IVREYEGRLPLYHLDIYRVGDDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITIT EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEE KRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY ECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYT CCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE IVREYEGRLPLYHLDIYRVGDDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITIT EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEE KRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY ECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]