Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is glpF [H]
Identifier: 15675543
GI number: 15675543
Start: 1395887
End: 1396588
Strand: Reverse
Name: glpF [H]
Synonym: SPy_1682
Alternate gene names: 15675543
Gene position: 1396588-1395887 (Counterclockwise)
Preceding gene: 15675544
Following gene: 15675542
Centisome position: 75.39
GC content: 46.3
Gene sequence:
>702_bases ATGGATATCTTTGGCGAATTTTTGGGTACAGCCTTATTGGTTTTACTAGGAAATGGTGTGGTAGCAGGGGTTGTCTTGCC CAAAACGAAAACCCATGCTTCTGGCTGGATCGTGATTGCGACTGGCTGGGGAATTGCAGTTGCTGTGGCAGTCTTTATCA GTGGCAAAGTTGCCCCTGCCCACCTCAATCCAGCTGTTAGCCTTGCTTTTGCCATGAGTGGAACCATTGCCTGGTCAACA GCCATTGCCTATAGCCTTGCCCAACTATTGGGAGCTATGGTTGGTTCAACTCTGGTATTCCTTCAGTTCAGGCCACATTA TCTGGCTGCTGAGAGTCAGGCTGATATTTTAGGGACATTTGCGACAGGTCCTGCTATTCGAGATACTAGCTCAAACCTAT TGAGTGAAATCTTTGGGACCTTTGTCTTGATGCTTGGTATTTTGGCATTTGGCTTATATGATATGCCAGCAGGACTAGGA ACCCTCTGTGTAGGTACCTTGGTTATTGGGATTGGGTTATCCTTAGGAGGAACGACAGGTTACGCCATTAACCCAGCACG TGATTTAGGACCTCGTCTAGTTCATGCTATTCTACCACTCAACAACAAGGGAGATTCTGATTGGTCTTATGCTTGGATAC CTGTTGTAGGACCAATTATTGGAGCGGTCTTAGCAGTTTTGCTTTTCCAAGTCATGTCCTAA
Upstream 100 bases:
>100_bases GAATGGTCTGATCAGGAAAGAGTGGCACAAGAAGACGATCTTCGTCGCGTGATTGCAGACAATGATTTGAGTGCCTTAAA AGGCCATCAGGAGGGTTAAT
Downstream 100 bases:
>100_bases CCATCACTAAAGGGGTTGGCTATCATAGGCCAGCTCCTTTGCATTTTCTTTATAGGATTAGGTAAAACGCTTTCATATCT TAAAAAAACTGCTATAATAA
Product: putative glycerol uptake facilitator
Products: glycerol [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDIFGEFLGTALLVLLGNGVVAGVVLPKTKTHASGWIVIATGWGIAVAVAVFISGKVAPAHLNPAVSLAFAMSGTIAWST AIAYSLAQLLGAMVGSTLVFLQFRPHYLAAESQADILGTFATGPAIRDTSSNLLSEIFGTFVLMLGILAFGLYDMPAGLG TLCVGTLVIGIGLSLGGTTGYAINPARDLGPRLVHAILPLNNKGDSDWSYAWIPVVGPIIGAVLAVLLFQVMS
Sequences:
>Translated_233_residues MDIFGEFLGTALLVLLGNGVVAGVVLPKTKTHASGWIVIATGWGIAVAVAVFISGKVAPAHLNPAVSLAFAMSGTIAWST AIAYSLAQLLGAMVGSTLVFLQFRPHYLAAESQADILGTFATGPAIRDTSSNLLSEIFGTFVLMLGILAFGLYDMPAGLG TLCVGTLVIGIGLSLGGTTGYAINPARDLGPRLVHAILPLNNKGDSDWSYAWIPVVGPIIGAVLAVLLFQVMS >Mature_233_residues MDIFGEFLGTALLVLLGNGVVAGVVLPKTKTHASGWIVIATGWGIAVAVAVFISGKVAPAHLNPAVSLAFAMSGTIAWST AIAYSLAQLLGAMVGSTLVFLQFRPHYLAAESQADILGTFATGPAIRDTSSNLLSEIFGTFVLMLGILAFGLYDMPAGLG TLCVGTLVIGIGLSLGGTTGYAINPARDLGPRLVHAILPLNNKGDSDWSYAWIPVVGPIIGAVLAVLLFQVMS
Specific function: Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane [H]
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI157266307, Length=245, Percent_Identity=36.734693877551, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI4826645, Length=242, Percent_Identity=36.7768595041322, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI22538420, Length=246, Percent_Identity=33.739837398374, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI4502187, Length=245, Percent_Identity=32.2448979591837, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI4502181, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4755125, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4502179, Length=237, Percent_Identity=31.6455696202532, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI37694062, Length=235, Percent_Identity=28.5106382978723, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI86792455, Length=233, Percent_Identity=29.6137339055794, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI6912506, Length=238, Percent_Identity=30.2521008403361, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1790362, Length=246, Percent_Identity=33.739837398374, Blast_Score=99, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994009, Length=229, Percent_Identity=33.1877729257642, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17531431, Length=240, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17531429, Length=240, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17544068, Length=244, Percent_Identity=33.6065573770492, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71992966, Length=246, Percent_Identity=26.4227642276423, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17558372, Length=235, Percent_Identity=31.063829787234, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17533613, Length=235, Percent_Identity=30.6382978723404, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564052, Length=235, Percent_Identity=30.6382978723404, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321054, Length=219, Percent_Identity=30.1369863013699, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322985, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24652747, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551084, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24762342, Length=239, Percent_Identity=26.3598326359833, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 23981; Mature: 23981
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFGEFLGTALLVLLGNGVVAGVVLPKTKTHASGWIVIATGWGIAVAVAVFISGKVAPA CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCC HLNPAVSLAFAMSGTIAWSTAIAYSLAQLLGAMVGSTLVFLQFRPHYLAAESQADILGTF CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCHHEEEC ATGPAIRDTSSNLLSEIFGTFVLMLGILAFGLYDMPAGLGTLCVGTLVIGIGLSLGGTTG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC YAINPARDLGPRLVHAILPLNNKGDSDWSYAWIPVVGPIIGAVLAVLLFQVMS CEECCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDIFGEFLGTALLVLLGNGVVAGVVLPKTKTHASGWIVIATGWGIAVAVAVFISGKVAPA CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCC HLNPAVSLAFAMSGTIAWSTAIAYSLAQLLGAMVGSTLVFLQFRPHYLAAESQADILGTF CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCHHEEEC ATGPAIRDTSSNLLSEIFGTFVLMLGILAFGLYDMPAGLGTLCVGTLVIGIGLSLGGTTG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC YAINPARDLGPRLVHAILPLNNKGDSDWSYAWIPVVGPIIGAVLAVLLFQVMS CEECCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: glycerol [Periplasm] [C]
Specific reaction: glycerol [Periplasm] = glycerol [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7565084; 11463916 [H]