| Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
|---|---|
| Accession | NC_002737 |
| Length | 1,852,441 |
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The map label for this gene is cshB [H]
Identifier: 15675529
GI number: 15675529
Start: 1378395
End: 1379738
Strand: Reverse
Name: cshB [H]
Synonym: SPy_1659
Alternate gene names: 15675529
Gene position: 1379738-1378395 (Counterclockwise)
Preceding gene: 15675530
Following gene: 15675528
Centisome position: 74.48
GC content: 41.96
Gene sequence:
>1344_bases ATGTCATTTAAAGATTATCATTTTAAGCAATACGTTCAGCAAGCGCTGGAAGAAATTGGCTTTGTCAATCCAACAGAGGT CCAGAAGCGGCTGATTCCTATTGTTAACTCCGGTCGTGACTTAGTTGGGGAATCAAAAACAGGTTCAGGGAAAACCCACA CCTTTTTGTTGCCCATTTTTGAAAAACTTGATGAAGCTAAAGCAGAAGTGCAAGTCGTTATTACAGCACCTAGCCGTGAA TTAGCAACTCAAATTTTTGATGCTTGTAAACAGATTGCTAAGCACTTCCAAGAAGAGATTCGTTTGGCCAACTATGTTGG AGGCACAGACAAACTCCGTCAGATTGAAAAACTAAAAGACAGCCAGCCGCATATTGTCATCGGGACCCCAGGTCGTATTT ATGACTTGGTCAAGTCTGGTGATTTAGCGATTCATAAAGCAACGACCTTTGTTGTGGATGAGGCCGATATGACCATGGAC ATGGGCTTTTTGGATACGGTAGATAAGATTGCAGCTTCGCTTCCAAAATCTGTTCAGATTTTGGTGTTCTCAGCAACTAT TCCACAGAAATTACAACCCTTTTTGAAAAAATACTTGACCAATCCTGTTATTGAACAAATCAAGACAAAGACCGTTATCG CAGATACCATTGATAACTGGCTTGTGTCGACAAAAGGGCGTGATAAGAATGGTCAACTGTTAGAGATTCTCAAAACCATG CAGCCTTATATGGCTATGCTTTTTGTCAATACCAAGGAACGCGCAGATGATTTGCATGCCTTTTTAACAGCTAATGGCTT AAAAGTGGCTAAGATTCATGGGGGCATTCCTCCAAGAGAACGTAAGCGCATCATGAACCAAGTCAAAAAACTGGACTTTG AATACATTGTTGCCACAGACTTAGCAGCGCGTGGGATTGACATTGAAGGGGTCAGCCATGTGATCAATGACGCCATCCCA CAAGACTTGTCTTTCTTTGTCCATCGTGTAGGCCGAACAGGTCGAAATGGTATGGCAGGAACTGCCATTACACTTTACCA GCCAAGTGACGACTCAGATATCAAAGAGCTGGAAAAAATGGGGATTGCCTTTACACCGAAGGTGCTCAAAAATGGAGAAT TTCAAGATACCTATGACCGTGATCGCCGTCAAAACCGTGAAAAAGCCTATCAAAAATTAGACACAGAAATGATTGGTTTG GTCAAAAAGAAAAAGAAAAAAGTCAAACCAGGTTACAAGAAAAAAATTCAGTGGGCGGTTGATGAAAAACGTCGCAAAGA ACGTCGTGCTGAAAATCGTGCTAAGGGCCGCGCTGAGCGTAAGGCCAAAAAACAACATTTTTAA
Upstream 100 bases:
>100_bases GTGGAGATGACCCACAAATGCTGATTTTGCGAGTGTTGTCCCACTCCTTTTGCTTGTCTCTAACAATAATGATATAATAT GGAAGAAAACGAGGTAAAAC
Downstream 100 bases:
>100_bases GAACAAAGAGCAAGCAAGTGATCAATTGGCATCTAATCTTGCTTTTTTTACACCTGCTACTTGTATTGTTTACCATTTGT TAACACAAAAAGTGATCATA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSGKTHTFLLPIFEKLDEAKAEVQVVITAPSRE LATQIFDACKQIAKHFQEEIRLANYVGGTDKLRQIEKLKDSQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMD MGFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLTNPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTM QPYMAMLFVNTKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATDLAARGIDIEGVSHVINDAIP QDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGL VKKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERKAKKQHF
Sequences:
>Translated_447_residues MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSGKTHTFLLPIFEKLDEAKAEVQVVITAPSRE LATQIFDACKQIAKHFQEEIRLANYVGGTDKLRQIEKLKDSQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMD MGFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLTNPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTM QPYMAMLFVNTKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATDLAARGIDIEGVSHVINDAIP QDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGL VKKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERKAKKQHF >Mature_446_residues SFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSGKTHTFLLPIFEKLDEAKAEVQVVITAPSREL ATQIFDACKQIAKHFQEEIRLANYVGGTDKLRQIEKLKDSQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDM GFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLTNPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTMQ PYMAMLFVNTKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATDLAARGIDIEGVSHVINDAIPQ DLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGLV KKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERKAKKQHF
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=33.0623306233062, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI7661920, Length=359, Percent_Identity=29.8050139275766, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI169881239, Length=403, Percent_Identity=31.7617866004963, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI13514809, Length=403, Percent_Identity=31.7617866004963, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI301171467, Length=414, Percent_Identity=31.1594202898551, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI87196351, Length=403, Percent_Identity=31.2655086848635, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI301171475, Length=403, Percent_Identity=31.2655086848635, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=32.3287671232877, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=31.3559322033898, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=31.3559322033898, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=35.9459459459459, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI148613856, Length=387, Percent_Identity=33.5917312661499, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38201710, Length=387, Percent_Identity=33.5917312661499, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=30.7909604519774, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI262118318, Length=370, Percent_Identity=31.8918918918919, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI164419743, Length=335, Percent_Identity=34.0298507462687, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI51094101, Length=335, Percent_Identity=34.0298507462687, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI216548263, Length=370, Percent_Identity=31.8918918918919, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI224593278, Length=370, Percent_Identity=32.1621621621622, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI262231852, Length=370, Percent_Identity=31.8918918918919, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI20149629, Length=360, Percent_Identity=31.6666666666667, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI13518015, Length=370, Percent_Identity=31.8918918918919, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI41327771, Length=400, Percent_Identity=30.5, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=33.6065573770492, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=31.4666666666667, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=31.4666666666667, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=32.5068870523416, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI83700235, Length=358, Percent_Identity=30.7262569832402, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI55749865, Length=368, Percent_Identity=30.4347826086957, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI4758138, Length=387, Percent_Identity=31.266149870801, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI4503529, Length=358, Percent_Identity=29.608938547486, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=31.2328767123288, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI50659095, Length=363, Percent_Identity=32.5068870523416, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI188035877, Length=398, Percent_Identity=31.1557788944724, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI256223453, Length=392, Percent_Identity=29.0816326530612, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=30.9090909090909, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI6005743, Length=355, Percent_Identity=31.830985915493, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI8922886, Length=355, Percent_Identity=31.5492957746479, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI62241022, Length=338, Percent_Identity=32.2485207100592, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=28.4931506849315, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI41327776, Length=360, Percent_Identity=30.2777777777778, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=27.1356783919598, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=32.1022727272727, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI164419732, Length=340, Percent_Identity=27.6470588235294, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI38327634, Length=367, Percent_Identity=29.9727520435967, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI38569505, Length=357, Percent_Identity=29.6918767507003, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI38569503, Length=357, Percent_Identity=29.6918767507003, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=28.7878787878788, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI17505907, Length=396, Percent_Identity=25.5050505050505, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=26.6457680250784, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI154759257, Length=365, Percent_Identity=25.2054794520548, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI20336298, Length=146, Percent_Identity=34.2465753424658, Blast_Score=83, Evalue=6e-16, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=33.6898395721925, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1787016, Length=366, Percent_Identity=31.4207650273224, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI1787605, Length=335, Percent_Identity=31.6417910447761, Blast_Score=187, Evalue=8e-49, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=32.6704545454545, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1788930, Length=342, Percent_Identity=33.0409356725146, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI48994977, Length=119, Percent_Identity=25.2100840336134, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=30.6406685236769, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=33.5120643431635, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=33.8935574229692, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=28.9693593314763, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=29.4444444444444, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=28.6908077994429, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=33.0459770114943, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI32565321, Length=409, Percent_Identity=31.0513447432763, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=32.0474777448071, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=32.0474777448071, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=35.1744186046512, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17510307, Length=379, Percent_Identity=31.3984168865435, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17510309, Length=379, Percent_Identity=31.3984168865435, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=31.2169312169312, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71995514, Length=379, Percent_Identity=31.3984168865435, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=34.1666666666667, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=30.9859154929577, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=29.0488431876607, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17507877, Length=386, Percent_Identity=32.1243523316062, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17555296, Length=359, Percent_Identity=30.6406685236769, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI115533224, Length=353, Percent_Identity=31.4447592067989, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17507879, Length=383, Percent_Identity=31.8537859007833, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI115532548, Length=368, Percent_Identity=28.2608695652174, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI115532546, Length=368, Percent_Identity=28.2608695652174, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507881, Length=388, Percent_Identity=29.639175257732, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=27.9255319148936, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=24.7058823529412, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=26.9121813031161, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=27.3869346733668, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71990816, Length=364, Percent_Identity=29.9450549450549, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=29.023746701847, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17536101, Length=379, Percent_Identity=29.023746701847, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=29.023746701847, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=224, Percent_Identity=33.9285714285714, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=27.2486772486773, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=29.4117647058824, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17505370, Length=347, Percent_Identity=27.3775216138329, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=26.8421052631579, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17556951, Length=321, Percent_Identity=28.3489096573209, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=24.7126436781609, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=25.7668711656442, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71997889, Length=353, Percent_Identity=23.7960339943343, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=37.1134020618557, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=34.4632768361582, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=33.4254143646409, Blast_Score=203, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=32.1899736147757, Blast_Score=202, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=34.733893557423, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=31.4606741573034, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=361, Percent_Identity=30.1939058171745, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=30.3867403314917, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=32.6923076923077, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=33.0555555555556, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322912, Length=359, Percent_Identity=30.9192200557103, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=359, Percent_Identity=30.9192200557103, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=29.9435028248588, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=31.9148936170213, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=30.0275482093664, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=241, Percent_Identity=35.6846473029046, Blast_Score=156, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=419, Percent_Identity=28.4009546539379, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=30.08356545961, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6320449, Length=369, Percent_Identity=30.3523035230352, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=375, Percent_Identity=32.8, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=383, Percent_Identity=29.242819843342, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=27.4509803921569, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=28.7709497206704, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=26.0869565217391, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=419, Percent_Identity=24.8210023866348, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI24645031, Length=359, Percent_Identity=30.9192200557103, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI17985987, Length=385, Percent_Identity=33.2467532467532, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24584399, Length=342, Percent_Identity=35.9649122807018, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=33.4231805929919, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=31.3672922252011, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=32.6027397260274, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=31.3672922252011, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=32.0441988950276, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=32.0441988950276, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=32.0441988950276, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=32.0441988950276, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581954, Length=361, Percent_Identity=32.409972299169, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581952, Length=361, Percent_Identity=32.409972299169, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581956, Length=361, Percent_Identity=32.409972299169, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28575014, Length=344, Percent_Identity=31.9767441860465, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI21356161, Length=353, Percent_Identity=31.1614730878187, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI18857967, Length=371, Percent_Identity=30.4582210242588, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=34.0116279069767, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24585582, Length=351, Percent_Identity=31.9088319088319, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355075, Length=362, Percent_Identity=32.5966850828729, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24584994, Length=399, Percent_Identity=30.5764411027569, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI24662330, Length=352, Percent_Identity=30.6818181818182, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=29.7450424929178, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136814, Length=359, Percent_Identity=30.3621169916435, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=32.1875, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=30.5475504322767, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=30.5475504322767, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=29.144385026738, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=31.5068493150685, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24643725, Length=379, Percent_Identity=26.1213720316623, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI24666101, Length=388, Percent_Identity=29.639175257732, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=27.6923076923077, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=25.4285714285714, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI17136666, Length=415, Percent_Identity=25.5421686746988, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=24.1379310344828, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=24, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=29.2929292929293, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=29.2929292929293, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50795; Mature: 50663
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSGKTHTFLLPIF CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEHHHHH EKLDEAKAEVQVVITAPSRELATQIFDACKQIAKHFQEEIRLANYVGGTDKLRQIEKLKD HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC SQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDMGFLDTVDKIAASLPKSVQI CCCEEEEECCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE LVFSATIPQKLQPFLKKYLTNPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTM EEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH QPYMAMLFVNTKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHEEEHH LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKM HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGLVKKKKKKVKPGYKKKIQWAV CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DEKRRKERRAENRAKGRAERKAKKQHF HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSGKTHTFLLPIF CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEHHHHH EKLDEAKAEVQVVITAPSRELATQIFDACKQIAKHFQEEIRLANYVGGTDKLRQIEKLKD HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC SQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDMGFLDTVDKIAASLPKSVQI CCCEEEEECCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE LVFSATIPQKLQPFLKKYLTNPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTM EEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH QPYMAMLFVNTKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHEEEHH LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKM HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGLVKKKKKKVKPGYKKKIQWAV CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DEKRRKERRAENRAKGRAERKAKKQHF HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]