Click here to switch to the map view.

The map label for this gene is 15675456

Identifier: 15675456

GI number: 15675456

Start: 1285887

End: 1286735

Strand: Reverse

Name: 15675456

Synonym: SPy_1564

Alternate gene names: NA

Gene position: 1286735-1285887 (Counterclockwise)

Preceding gene: 15675457

Following gene: 15675455

Centisome position: 69.46

GC content: 38.04

Gene sequence:

>849_bases
ATGTTGGAACACAAAATTGATTTTATGGTAACTCTTGAAGTGAAAGAAGCAAATGCAAATGGTGATCCCTTAAATGGAAA
CATGCCTCGTACAGATGCCAAAGGATATGGTGTGATGAGTGATGTCTCCATTAAACGTAAGATTCGTAATCGTTTGCAAG
ATATGGGGAAGTCTATTTTTGTGCAAGCTAATGAGCGTATTGAAGATGATTTTCGTTCACTGGAAAAACGCTTTTCGCAA
CATTTTACAGCTAAGACACCTGACAAAGAAATTGAAGAAAAAGCAAATGCATTATGGTTTGATGTTCGTGCTTTTGGACA
AGTTTTTACTTATCTGAAAAAATCAATTGGGGTGCGTGGACCAGTTTCCATCAGTATGGCTAAGTCCTTGGAGCCAATTG
TCATTTCCAGCCTTCAAATTACGCGTAGTACCAATGGTATGGAAGCTAAGAATAATAGTGGCCGCTCTTCTGATACGATG
GGGACAAAACATTTTGTAGATTATGGTGTGTATGTACTTAAAGGTTCTATCAATGCTTATTTTGCTGAAAAGACTGGTTT
TTCTCAGGAAGATGCTGAGGCTATTAAAGAAGTTTTGGTTAGCTTGTTTGAAAATGATGCGTCGTCTGCACGTCCGGAAG
GCTCTATGCGAGTTTGTGAAGTCTTTTGGTTTACGCATTCAAGCAAATTGGGAAATGTTTCAAGTGCGCGTGTCTTTGAC
TTGTTAGAGTATCATCAATCAATAGAAGAAAAAAGCACTTATGACGCTTATCAGATTCATCTAAATCAAGAAAAATTGGC
TAAATATGAAGCGAAAGGGTTAACGCTTGAAATCCTAGAAGGACTCTAG

Upstream 100 bases:

>100_bases
AAACCCTTAGATTACCGCTTTATTTTTGGGTATTATGCTGAGAAAAACTATTACTATACAAAACAAAACACGGAAGTAAC
AGAAAGTGAGGAGTAAAAAG

Downstream 100 bases:

>100_bases
TATGGTCTATGCCGAAGATGATTATTTAATGCTGTCAGGTATTCAGCATTTCCAATTTTGTAAACGTCAATGGGCGTTGA
TCCATATTGAGCAACAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Protein Csh2 Family; Csd2 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Crispr-Associated Protein; Crispr-Protein; Cytoplasmic Protein; CRISPR-Associated Protein TM; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQ
HFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTM
GTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFD
LLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL

Sequences:

>Translated_282_residues
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQ
HFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTM
GTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFD
LLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>Mature_282_residues
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQ
HFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTM
GTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFD
LLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31780; Mature: 31780

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIF
CCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEE
VQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRG
EECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAY
CCCHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCCCEE
FAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFD
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH
LLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIF
CCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEE
VQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRG
EECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAY
CCCHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCCCEE
FAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFD
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH
LLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA