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The map label for this gene is 15675455

Identifier: 15675455

GI number: 15675455

Start: 1285211

End: 1285885

Strand: Reverse

Name: 15675455

Synonym: SPy_1563

Alternate gene names: NA

Gene position: 1285885-1285211 (Counterclockwise)

Preceding gene: 15675456

Following gene: 15675454

Centisome position: 69.42

GC content: 39.85

Gene sequence:

>675_bases
ATGGTCTATGCCGAAGATGATTATTTAATGCTGTCAGGTATTCAGCATTTCCAATTTTGTAAACGTCAATGGGCGTTGAT
CCATATTGAGCAACAATGGCTTGATAATGAAGCGACAGCGCATGGACAGGTTTTACATACTAAAGCAGATAACCCTTACA
TTAAAGAAAAACGAAAAGAGCTTTTGGTCTCACGTGCTATGCCCATTTCTTCTGCAGAACTTGGACTTTCAGGAATTATG
GATGTTGTGGAATTTTATAAAGATGATCAAGGTGTGTCTTTGAGGGGAAAACGTGGGAAATGGTTACCAAAAGTTGTGGA
ATACAAGCGCGGAAAACCTAAAAAAGATACCAGAGATATTGTCCAGTTGGTGGCTCAGACCATGTGTTTAGAAGAAACGC
TAGACTGCGACATTAACGAAGGTTGTCTTTATTACCATAGTGTCAATCAAAGAGTGATTGTTCCTATGACATCAGCTTTG
CGTCAAGAAGTGAAGGAATTAGCCGCAGAGATGCATGAGGTTTATCAGAGTCAAATGCTACCTAAAGCAGCTTATTTTAA
AAACTGTCAGCTTTGTTCTTTAGTCGATATTTGTAAGCCCAGGTTGAGTAAAAAAACAAGGAGTGTGTCGCGTTACATCA
ATGAGGCTATGACCAGTGAGGAGATGGACCTATGA

Upstream 100 bases:

>100_bases
AAAAGCACTTATGACGCTTATCAGATTCATCTAAATCAAGAAAAATTGGCTAAATATGAAGCGAAAGGGTTAACGCTTGA
AATCCTAGAAGGACTCTAGT

Downstream 100 bases:

>100_bases
AGAAGTTGCTAAATACCTTGTATTTGACGCAAGAAGATTTTTATGTCACTAAAGAGGGCGATAACATTGTTATCAAGCAA
GAAGGTAAGGTTCTCAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Cas4 Family CRISPR-Associated Protein; Exonuclease RecB Family Protein; Exonuclease N; CRISPR-Associated Cas1 Family Protein; PE-PGRS Family Protein; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIM
DVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSAL
RQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL

Sequences:

>Translated_224_residues
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIM
DVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSAL
RQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>Mature_224_residues
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIM
DVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSAL
RQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25898; Mature: 25898

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKE
CCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
LLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDI
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHH
VQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQML
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKE
CCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
LLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDI
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHH
VQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQML
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA