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The map label for this gene is sepF

Identifier: 15675418

GI number: 15675418

Start: 1247051

End: 1247707

Strand: Reverse

Name: sepF

Synonym: SPy_1518

Alternate gene names: 15675418

Gene position: 1247707-1247051 (Counterclockwise)

Preceding gene: 15675419

Following gene: 15675417

Centisome position: 67.35

GC content: 37.75

Gene sequence:

>657_bases
ATGGCTTTTAAAGATACATTTAACAAGATGATTTCTTATTTTGACACGGATGAGGTTAACGAAGTTGAAGAAGATGTTGC
AGCATCAACTGATAACGTTATTCCAAGATCACAACAATCAGTCAGAGCAAGTAGTCATCCAAAACAAGAACCTAGAAACA
ATCACGTACAACAAGATCATCAAGCGAGATCCCAAGAACAGACAAGGTCACAAATGCATCCAAAACATGGCACTTCTGAA
CGCTATTATCAGCAGTCTCAGCCAAAAGAAGGCCATGAAATGGTTGACAGAAGAAAACGGATGAGCACTTCTAGTATTGC
AAATCGCCGTGAGCAGTATCAACAATCAACTTGTTCAGATCAAACAACTATTGCCTTAAAGTATCCTCGTAAATATGAGG
ATGCTCAAGAAATTGTGGATCTTTTAATAGTTAATGAATGCGTTTTGATTGATTTTCAGTTTATGCTAGATGCTCAGGCT
AGACGGTGTTTAGATTTTATTGATGGTGCTAGTAAAGTGCTCTATGGTAGCTTACAAAAGGTCGGCTCTTCAATGTACTT
ACTGGCTCCGTCAAATGTATCCGTCAATATAGAAGAAATGACTATCCCACATACTACACAAGATATTGGCTTTGATTTTG
ATATGAAAAGGCGGTAA

Upstream 100 bases:

>100_bases
AATTGAGCATGGGCATGAGTAACGATTATCCAATTGCTATTCAAGAAGGCTCAACTTTTATTCGGATTGGTAGAGCTTTC
TTTCACTAATGGAGAATAAG

Downstream 100 bases:

>100_bases
ATAAATGATATTAATACTATCTATTCTTCTTCGTCTGATCAAAGTTTACACTTATTTATTGATTGCTTACGCATTAATGT
CATGGTTTCCTGGGGCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSE
RYYQQSQPKEGHEMVDRRKRMSTSSIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQA
RRCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR

Sequences:

>Translated_218_residues
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSE
RYYQQSQPKEGHEMVDRRKRMSTSSIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQA
RRCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
>Mature_217_residues
AFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSER
YYQQSQPKEGHEMVDRRKRMSTSSIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQAR
RCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_STRP1 (Q48XR0)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_269592.1
- RefSeq:   YP_282610.1
- ProteinModelPortal:   Q48XR0
- EnsemblBacteria:   EBSTRT00000001384
- EnsemblBacteria:   EBSTRT00000028373
- GeneID:   3571676
- GeneID:   901563
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_1518
- KEGG:   spz:M5005_Spy_1247
- GeneTree:   EBGT00050000027759
- HOGENOM:   HBG700081
- OMA:   SENEVHE
- ProtClustDB:   CLSK877217
- BioCyc:   SPYO293653:M5005_SPY1247-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 25249; Mature: 25118

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
QARSQEQTRSQMHPKHGTSERYYQQSQPKEGHEMVDRRKRMSTSSIANRREQYQQSTCSD
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQARRCLDFIDGASKVLYGSLQK
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
HCCCEEEEECCCCEEEEEEEECCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDH
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
QARSQEQTRSQMHPKHGTSERYYQQSQPKEGHEMVDRRKRMSTSSIANRREQYQQSTCSD
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQARRCLDFIDGASKVLYGSLQK
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
HCCCEEEEECCCCEEEEEEEECCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296