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The map label for this gene is yrrM [H]

Identifier: 15675315

GI number: 15675315

Start: 1154205

End: 1154912

Strand: Reverse

Name: yrrM [H]

Synonym: SPy_1391

Alternate gene names: 15675315

Gene position: 1154912-1154205 (Counterclockwise)

Preceding gene: 15675316

Following gene: 15675314

Centisome position: 62.35

GC content: 38.7

Gene sequence:

>708_bases
ATGGTTAAATCATACAGTAAAACAGCAAATCATAATATGCGTCGTCCTGTTGTCAAAGAAGAGCTTGTTCATTATATGCG
AACACGGCAGAAGCAAACCACAGGTTTTTTAGCAGAGTTAGAGCAATTCGCAAGACAAGAAAACATTCCTATTATTCAGC
CTGAGGTCGTGGCTTATTTCAGGTTTTTATTGCAAAGCTTACAGCCAAAACACATTTTGGAGATTGGCACAGCCATTGGT
TTTTCTGCGCTTTTAATGGCTGAAAATGCACCAGATGCGACGATTGTGACTATTGATCGTAATCGAGAGATGATCGATTT
TGCTAAAGCAAATTTTGCTAAGTACGACAGTCGCCAACAGATCCGCCTGTTAGAAGGAGATGCAGCAGATATATTATCTA
CACTTGAAGGAAATTTTGACTTTGTGTTTATGGATTCCGCCAAATCCAAATATATTGTCTTTCTACCAGAGATTTTAAGA
CTGCTAAAAGTCGGTGGTGTAGTCATTTTGGATGATGTCTTTCAAGGAGGTGACATTACAAAACCGATCGAAGATATTCG
ACGAGGTCAGCGTACTATTTATCGTGGCTTACAGTCTTTGTTTGATGCCACCTTAACTCATCCAAACCTAACAACTAGCC
TGGTCCCTCTTAGTGATGGATTATTAATGATTCGTAAAAATCAAGCAGATATTGTATTACCAGATTAA

Upstream 100 bases:

>100_bases
TAGGATTAATGGTAGCATTAAGGTTAAAGAAATGATGTCCTATAAAAAATTTAAAAGTAAACCCTAGCAAAGCCTAGGGT
TTTTTTATATAATTAGGTTT

Downstream 100 bases:

>100_bases
GTAACATTGATAAATTTATGTTATAATAAATTAGTTAAAGATAAAAAGGAGCTCAGAAGTAAATGAAAAACTCAAATAAA
CTCATTGCTAGTGTTGTGAC

Product: O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVKSYSKTANHNMRRPVVKEELVHYMRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIG
FSALLMAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILR
LLKVGGVVILDDVFQGGDITKPIEDIRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD

Sequences:

>Translated_235_residues
MVKSYSKTANHNMRRPVVKEELVHYMRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIG
FSALLMAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILR
LLKVGGVVILDDVFQGGDITKPIEDIRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD
>Mature_235_residues
MVKSYSKTANHNMRRPVVKEELVHYMRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIG
FSALLMAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILR
LLKVGGVVILDDVFQGGDITKPIEDIRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001028, Length=182, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI72001127, Length=181, Percent_Identity=26.5193370165746, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 26670; Mature: 26670

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSYSKTANHNMRRPVVKEELVHYMRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYF
CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RFLLQSLQPKHILEIGTAIGFSALLMAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQ
HHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
IRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILRLLKVGGVVILDDVFQGGDIT
EEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCCC
KPIEDIRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCEECCC
>Mature Secondary Structure
MVKSYSKTANHNMRRPVVKEELVHYMRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYF
CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RFLLQSLQPKHILEIGTAIGFSALLMAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQ
HHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
IRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILRLLKVGGVVILDDVFQGGDIT
EEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCCC
KPIEDIRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]