Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yjhB [C]
Identifier: 15675278
GI number: 15675278
Start: 1109509
End: 1110729
Strand: Reverse
Name: yjhB [C]
Synonym: SPy_1340
Alternate gene names: 15675278
Gene position: 1110729-1109509 (Counterclockwise)
Preceding gene: 15675280
Following gene: 15675276
Centisome position: 59.96
GC content: 42.18
Gene sequence:
>1221_bases ATGTCAACATTATCATTGGACACCACAAATAAGCGAGCTTTAGTGGCAGCTATTGCAGCTTCAGGAACGGATGACTTGAA TGTCATGTTTCTTGCCTTTTCCATGTCTTCCATTATGACAGACTTGGGTCTTAGTGGCACTCAGGGTGGCTGGATTGCGA CCATTACCAATTTAGGAATGTTGGTGGGAGGCCTCTTATTCGGGTTGCTGGCTGATAGGCACCACAAGTTTAAGGTCTTT AAATGGACGATTTTACTGTTTTCAGTAGCAACAGGATTAATTTATTTTACCCAGTCTTTGCCCTACCTGTACCTGATGCG ATTTATTGCTGGCATAGGAGTTGGAGGTGAGTACGGTGTAGCCATTGCCATAATGGCAGGGATTGTACCACCAGAAAAAA TGGGTCGGATGTCTTCTTTAAATGGTATTGCTGGCCAGCTTGGCTCTATTAGTTCGGCTCTTTTAGCAGGGTGGCTGGCT CCAAGTCTAGGCTGGCGTGGCCTTTTTCTCTTTGGATTACTTCCGATTCTCTTGGTGATTTGGATGACTTTAGCCATAGA TGACCAAAAAATTTGGGATCATTATGGGCAAGAGGAGGAAGAATGCAGTCAACCAATTAAAATCAATGAACTATTCAAAA CAAAATCCTTAACAGCTCAAACCCTTGCTTTAATGGTCATGACGACTGTGCAGATTGCGGGCTATTTTGGAATGATGAAT TGGTTGCCAACCATTATTCAAACAAGCTTAAACCTTTCAGTAAAAAGTTCGTCCTTGTGGATGGTGGCTACTATTGTCGG CATGTGTTTGGGGATGCTGTATTTTGGTCAGCTTTTAGATTGCTTTGGTCCACGTCTGATTTATTCCCTCTTTTTATTAG CATCATCTATTTGTGTTTACCTTTTTCAATTTGCCAATTCCATGGCGAGTATGGTTATTGGAGGTGCTATTGTCGGTTTT TTTGTCAATGGGATGTTTGCTGGCTACGGGGCTATGATTACCAGACTTTATCCCCATCACATTCGATCCACGGCTAATAA TGTTATTTTGAATGTTGGCCGTGCTCTAGGAGGATTTTCGTCCGTTGCTATTGGTAGTATTTTAGATGCCTCAGGTATTT CAATGGTCATGATTTTCCTAGCTTCTCTGTATGTGATTAGTTTTGGAGCCATGTGGTCTATTGGTCAGTTAAAAGCAGAA CGCTACCAACAATTGCGTTAG
Upstream 100 bases:
>100_bases GGACTTGCGGACTTGTTTCCAAGTCTTTTTTTGACCTTTGGACAAAGGGTATTCAATTAATTAAGGTAGTCAGTGAGCTA CTATTAAGAAGGAGACAATT
Downstream 100 bases:
>100_bases CAAAGAGATGGGTGTTAGTATTTGAGTTACTTTCACTCACAAAGCTATTTTATTGATTGAGATAACCAAAAAGGTAAGCA CTTAGGGATTGCTTACCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSTLSLDTTNKRALVAAIAASGTDDLNVMFLAFSMSSIMTDLGLSGTQGGWIATITNLGMLVGGLLFGLLADRHHKFKVF KWTILLFSVATGLIYFTQSLPYLYLMRFIAGIGVGGEYGVAIAIMAGIVPPEKMGRMSSLNGIAGQLGSISSALLAGWLA PSLGWRGLFLFGLLPILLVIWMTLAIDDQKIWDHYGQEEEECSQPIKINELFKTKSLTAQTLALMVMTTVQIAGYFGMMN WLPTIIQTSLNLSVKSSSLWMVATIVGMCLGMLYFGQLLDCFGPRLIYSLFLLASSICVYLFQFANSMASMVIGGAIVGF FVNGMFAGYGAMITRLYPHHIRSTANNVILNVGRALGGFSSVAIGSILDASGISMVMIFLASLYVISFGAMWSIGQLKAE RYQQLR
Sequences:
>Translated_406_residues MSTLSLDTTNKRALVAAIAASGTDDLNVMFLAFSMSSIMTDLGLSGTQGGWIATITNLGMLVGGLLFGLLADRHHKFKVF KWTILLFSVATGLIYFTQSLPYLYLMRFIAGIGVGGEYGVAIAIMAGIVPPEKMGRMSSLNGIAGQLGSISSALLAGWLA PSLGWRGLFLFGLLPILLVIWMTLAIDDQKIWDHYGQEEEECSQPIKINELFKTKSLTAQTLALMVMTTVQIAGYFGMMN WLPTIIQTSLNLSVKSSSLWMVATIVGMCLGMLYFGQLLDCFGPRLIYSLFLLASSICVYLFQFANSMASMVIGGAIVGF FVNGMFAGYGAMITRLYPHHIRSTANNVILNVGRALGGFSSVAIGSILDASGISMVMIFLASLYVISFGAMWSIGQLKAE RYQQLR >Mature_405_residues STLSLDTTNKRALVAAIAASGTDDLNVMFLAFSMSSIMTDLGLSGTQGGWIATITNLGMLVGGLLFGLLADRHHKFKVFK WTILLFSVATGLIYFTQSLPYLYLMRFIAGIGVGGEYGVAIAIMAGIVPPEKMGRMSSLNGIAGQLGSISSALLAGWLAP SLGWRGLFLFGLLPILLVIWMTLAIDDQKIWDHYGQEEEECSQPIKINELFKTKSLTAQTLALMVMTTVQIAGYFGMMNW LPTIIQTSLNLSVKSSSLWMVATIVGMCLGMLYFGQLLDCFGPRLIYSLFLLASSICVYLFQFANSMASMVIGGAIVGFF VNGMFAGYGAMITRLYPHHIRSTANNVILNVGRALGGFSSVAIGSILDASGISMVMIFLASLYVISFGAMWSIGQLKAER YQQLR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=389, Percent_Identity=25.9640102827763, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87082231, Length=226, Percent_Identity=22.5663716814159, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87081723, Length=347, Percent_Identity=27.0893371757925, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788068, Length=386, Percent_Identity=22.020725388601, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790550, Length=342, Percent_Identity=23.0994152046784, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43958; Mature: 43827
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLSLDTTNKRALVAAIAASGTDDLNVMFLAFSMSSIMTDLGLSGTQGGWIATITNLGM CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVGGLLFGLLADRHHKFKVFKWTILLFSVATGLIYFTQSLPYLYLMRFIAGIGVGGEYGV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH AIAIMAGIVPPEKMGRMSSLNGIAGQLGSISSALLAGWLAPSLGWRGLFLFGLLPILLVI HHHHHHHCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WMTLAIDDQKIWDHYGQEEEECSQPIKINELFKTKSLTAQTLALMVMTTVQIAGYFGMMN HHHHHCCCHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPTIIQTSLNLSVKSSSLWMVATIVGMCLGMLYFGQLLDCFGPRLIYSLFLLASSICVY HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LFQFANSMASMVIGGAIVGFFVNGMFAGYGAMITRLYPHHIRSTANNVILNVGRALGGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SVAIGSILDASGISMVMIFLASLYVISFGAMWSIGQLKAERYQQLR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STLSLDTTNKRALVAAIAASGTDDLNVMFLAFSMSSIMTDLGLSGTQGGWIATITNLGM CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVGGLLFGLLADRHHKFKVFKWTILLFSVATGLIYFTQSLPYLYLMRFIAGIGVGGEYGV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH AIAIMAGIVPPEKMGRMSSLNGIAGQLGSISSALLAGWLAPSLGWRGLFLFGLLPILLVI HHHHHHHCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WMTLAIDDQKIWDHYGQEEEECSQPIKINELFKTKSLTAQTLALMVMTTVQIAGYFGMMN HHHHHCCCHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPTIIQTSLNLSVKSSSLWMVATIVGMCLGMLYFGQLLDCFGPRLIYSLFLLASSICVY HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LFQFANSMASMVIGGAIVGFFVNGMFAGYGAMITRLYPHHIRSTANNVILNVGRALGGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SVAIGSILDASGISMVMIFLASLYVISFGAMWSIGQLKAERYQQLR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]