Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yxkH [H]
Identifier: 15675078
GI number: 15675078
Start: 895420
End: 896382
Strand: Reverse
Name: yxkH [H]
Synonym: SPy_1094
Alternate gene names: 15675078
Gene position: 896382-895420 (Counterclockwise)
Preceding gene: 15675089
Following gene: 15675063
Centisome position: 48.39
GC content: 36.45
Gene sequence:
>963_bases ATGAACAATAGACATAAACGGCGCCAAAAAAGAAAAGCCTTCACTCTCATTAACCTTATACTATTATTTGCCTGCATTCT TGGTTTGACCCTCATTTTCTATTTATATCAAGGGTCTAACAAATTCGGCTTGTCAGATGTCTCTCGATTTGTACCTAAAA TAAGTCTTTTTCATCACAAAAAGACGGCAAAAAAAGAAACGACAAAACTTAAGAAGACTCATTTCGATTCCTCAAAATCT CAAAAAAAGGCCCATTCTAAATTGACTTGGACCAAGCAAGAAACACCTGTCAAGATCCCAATTTTAATGTATCATGCTAT TCATGTAATGTCCCCTGAAGAGACGGCTAATGCTAATTTGATTGTCAACCCAGATCTCTTTGATCAACAACTTCAAAAAA TGAAAGACGAGGGCTACTATTTTTTGAGTCCTGAAGAGGTCTACCGCGCTCTTTCAAATAATGAATTGCCTGCTAAAAAA GTTGTATGGCTAACATTTGATGACAGTATGATTGATTTCTACAATGTTGCTTACCCAATCTTAAAAAAATATGATGCTAA AGCCACCAATAATGTTATTACAGGACTAACCGAAATGGGAAGCGCTGCCAATCTGACTCTTAAGCAGATGAAAGAAATGA AACAAGTCGGTATGTCTTTCCAAGATCATACAGTGAATCATCCTGATCTAGAGCAGGCTAGTCCTGATGTTCAAACAACT GAAATGAAAGATTCAAAGGACTATCTTGATAAGCAATTAAACCAAAACACTATTGCCATTGCTTATCCATCTGGTAGATA TAATGACACTACCTTACAAATTGCAGCTAGACTTAACTATAAATTAGGTGTTACCACTAACGAAGGAATAGCTAGCGCGG CTAATGGACTTCTTTCTCTTAACCGGATTCGTATCCTCCCAAACATGAGTCCTGAAAATCTTTTACAAACAATGGAACCA TAA
Upstream 100 bases:
>100_bases CACGTTCTTCCAAAAAACAAGAAAAAAGGCTGACTTCAAGCCTTCTTTTCTCTAAAAAATGTTACAATAGAGGTACTTAT ATCAAAAAAAGGAGCAAGTA
Downstream 100 bases:
>100_bases CATCAATTTTTTTATCATTCCAAATCATACTCACTGTAAACTAAAAAGACAGTTATGAAAAAATTCTTTCATAACTGTCT TTTTTTGATTGTTTTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNNRHKRRQKRKAFTLINLILLFACILGLTLIFYLYQGSNKFGLSDVSRFVPKISLFHHKKTAKKETTKLKKTHFDSSKS QKKAHSKLTWTKQETPVKIPILMYHAIHVMSPEETANANLIVNPDLFDQQLQKMKDEGYYFLSPEEVYRALSNNELPAKK VVWLTFDDSMIDFYNVAYPILKKYDAKATNNVITGLTEMGSAANLTLKQMKEMKQVGMSFQDHTVNHPDLEQASPDVQTT EMKDSKDYLDKQLNQNTIAIAYPSGRYNDTTLQIAARLNYKLGVTTNEGIASAANGLLSLNRIRILPNMSPENLLQTMEP
Sequences:
>Translated_320_residues MNNRHKRRQKRKAFTLINLILLFACILGLTLIFYLYQGSNKFGLSDVSRFVPKISLFHHKKTAKKETTKLKKTHFDSSKS QKKAHSKLTWTKQETPVKIPILMYHAIHVMSPEETANANLIVNPDLFDQQLQKMKDEGYYFLSPEEVYRALSNNELPAKK VVWLTFDDSMIDFYNVAYPILKKYDAKATNNVITGLTEMGSAANLTLKQMKEMKQVGMSFQDHTVNHPDLEQASPDVQTT EMKDSKDYLDKQLNQNTIAIAYPSGRYNDTTLQIAARLNYKLGVTTNEGIASAANGLLSLNRIRILPNMSPENLLQTMEP >Mature_320_residues MNNRHKRRQKRKAFTLINLILLFACILGLTLIFYLYQGSNKFGLSDVSRFVPKISLFHHKKTAKKETTKLKKTHFDSSKS QKKAHSKLTWTKQETPVKIPILMYHAIHVMSPEETANANLIVNPDLFDQQLQKMKDEGYYFLSPEEVYRALSNNELPAKK VVWLTFDDSMIDFYNVAYPILKKYDAKATNNVITGLTEMGSAANLTLKQMKEMKQVGMSFQDHTVNHPDLEQASPDVQTT EMKDSKDYLDKQLNQNTIAIAYPSGRYNDTTLQIAARLNYKLGVTTNEGIASAANGLLSLNRIRILPNMSPENLLQTMEP
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide deacetylase family [H]
Homologues:
Organism=Escherichia coli, GI1786322, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR002509 [H]
Pfam domain/function: PF01522 Polysacc_deac_1 [H]
EC number: NA
Molecular weight: Translated: 36524; Mature: 36524
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRHKRRQKRKAFTLINLILLFACILGLTLIFYLYQGSNKFGLSDVSRFVPKISLFHHK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KTAKKETTKLKKTHFDSSKSQKKAHSKLTWTKQETPVKIPILMYHAIHVMSPEETANANL HHHHHHHHHHHHHHCCCCHHHHHHHHHCEECCCCCCEEEHHHHHHHHHEECCCCCCCCEE IVNPDLFDQQLQKMKDEGYYFLSPEEVYRALSNNELPAKKVVWLTFDDSMIDFYNVAYPI EECCCHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH LKKYDAKATNNVITGLTEMGSAANLTLKQMKEMKQVGMSFQDHTVNHPDLEQASPDVQTT HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEC EMKDSKDYLDKQLNQNTIAIAYPSGRYNDTTLQIAARLNYKLGVTTNEGIASAANGLLSL CCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHEE NRIRILPNMSPENLLQTMEP CEEEECCCCCHHHHHHHCCC >Mature Secondary Structure MNNRHKRRQKRKAFTLINLILLFACILGLTLIFYLYQGSNKFGLSDVSRFVPKISLFHHK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KTAKKETTKLKKTHFDSSKSQKKAHSKLTWTKQETPVKIPILMYHAIHVMSPEETANANL HHHHHHHHHHHHHHCCCCHHHHHHHHHCEECCCCCCEEEHHHHHHHHHEECCCCCCCCEE IVNPDLFDQQLQKMKDEGYYFLSPEEVYRALSNNELPAKKVVWLTFDDSMIDFYNVAYPI EECCCHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH LKKYDAKATNNVITGLTEMGSAANLTLKQMKEMKQVGMSFQDHTVNHPDLEQASPDVQTT HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEC EMKDSKDYLDKQLNQNTIAIAYPSGRYNDTTLQIAARLNYKLGVTTNEGIASAANGLLSL CCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHEE NRIRILPNMSPENLLQTMEP CEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]