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The map label for this gene is srtT [H]

Identifier: 15675072

GI number: 15675072

Start: 888954

End: 889571

Strand: Direct

Name: srtT [H]

Synonym: SPy_1084

Alternate gene names: 15675072

Gene position: 888954-889571 (Clockwise)

Preceding gene: 15675071

Following gene: 15675073

Centisome position: 47.99

GC content: 31.55

Gene sequence:

>618_bases
ATGATTAAAGCTCAGCTAAAGAATCTAATAAAAACAATTCATCTCGTAAAAGAGGCTGGTTTCTCCCTAAATGGTTCATT
GTACATGGAGTTATTGCATGATTTTACGCATGATGAGTTAGTACATAACCCTATAATCGAAAGTACGGTTGATACAATTC
AGTCAGTTGAATTTGAAAGGGTTTCTTTTTCATATAATGGTAAGGATAATGTAATAAACGATATAAGTTTTTCAATTAAA
GCAGGAGAGAGGTTAGCAATTGTTGGTGGAAATGGTTCTGGAAAAAGTACGATTTTCAAATTAGCCTGCGGTCTTTACGA
TAATTATGAAGGCAATATATATATAAATGGTATTAATCTTTGTTCAATACAGAAAAAGTCATACTACAAGAGAATATCCG
CATTGTTCCAAGATTTTTTAAAGTATGAATTGACACTGCGTGAAAATGTTGGATTGGGTGAATTATCAAAGTTATATAGT
GATGAGTCTTATAATACTTCATTTTTTACCACATCATGGGATTCAGAGAATGAACTGCGATTGGAGGATATTTATATAAG
ATATAGTGATGGTAAGTTTCATTTTACAACTATCGATGAATCGATTAAACGGGATTGA

Upstream 100 bases:

>100_bases
TCATAAACATTATAATTTCAAATAATTTTATATATTTATAAATTTAGGGGAGTAGACTGATTTTAGTTTGCTCCTTTATT
AGTAGATAAGGAAGTTATAC

Downstream 100 bases:

>100_bases
TAGAGAGTTTGAAGAGAAAGTGTATTGTTTTGCTTACTATACACTAAACGCTCAGCAATATATAGAATGGGAGTAACTAA
TATGTTGAAAATACAAAATC

Product: lantibiotic associated ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIKAQLKNLIKTIHLVKEAGFSLNGSLYMELLHDFTHDELVHNPIIESTVDTIQSVEFERVSFSYNGKDNVINDISFSIK
AGERLAIVGGNGSGKSTIFKLACGLYDNYEGNIYINGINLCSIQKKSYYKRISALFQDFLKYELTLRENVGLGELSKLYS
DESYNTSFFTTSWDSENELRLEDIYIRYSDGKFHFTTIDESIKRD

Sequences:

>Translated_205_residues
MIKAQLKNLIKTIHLVKEAGFSLNGSLYMELLHDFTHDELVHNPIIESTVDTIQSVEFERVSFSYNGKDNVINDISFSIK
AGERLAIVGGNGSGKSTIFKLACGLYDNYEGNIYINGINLCSIQKKSYYKRISALFQDFLKYELTLRENVGLGELSKLYS
DESYNTSFFTTSWDSENELRLEDIYIRYSDGKFHFTTIDESIKRD
>Mature_205_residues
MIKAQLKNLIKTIHLVKEAGFSLNGSLYMELLHDFTHDELVHNPIIESTVDTIQSVEFERVSFSYNGKDNVINDISFSIK
AGERLAIVGGNGSGKSTIFKLACGLYDNYEGNIYINGINLCSIQKKSYYKRISALFQDFLKYELTLRENVGLGELSKLYS
DESYNTSFFTTSWDSENELRLEDIYIRYSDGKFHFTTIDESIKRD

Specific function: Probably implicated in the export process of the lantibiotic subtilin [H]

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42490749, Length=102, Percent_Identity=36.2745098039216, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI9955963, Length=101, Percent_Identity=34.6534653465347, Blast_Score=70, Evalue=9e-13,
Organism=Escherichia coli, GI1788540, Length=85, Percent_Identity=40, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115534520, Length=103, Percent_Identity=33.9805825242718, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193208177, Length=101, Percent_Identity=36.6336633663366, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=157, Percent_Identity=29.9363057324841, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71996550, Length=107, Percent_Identity=37.3831775700935, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=100, Percent_Identity=35, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=100, Percent_Identity=35, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=100, Percent_Identity=35, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=124, Percent_Identity=33.0645161290323, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=101, Percent_Identity=31.6831683168317, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=149, Percent_Identity=30.2013422818792, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=107, Percent_Identity=32.7102803738318, Blast_Score=63, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=107, Percent_Identity=33.6448598130841, Blast_Score=63, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=100, Percent_Identity=39, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322640, Length=161, Percent_Identity=32.2981366459627, Blast_Score=68, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21357907, Length=137, Percent_Identity=33.5766423357664, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221474134, Length=96, Percent_Identity=35.4166666666667, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23467; Mature: 23467

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAQLKNLIKTIHLVKEAGFSLNGSLYMELLHDFTHDELVHNPIIESTVDTIQSVEFER
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCEEE
VSFSYNGKDNVINDISFSIKAGERLAIVGGNGSGKSTIFKLACGLYDNYEGNIYINGINL
EEEEECCCCCEECCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEE
CSIQKKSYYKRISALFQDFLKYELTLRENVGLGELSKLYSDESYNTSFFTTSWDSENELR
EEEHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEE
LEDIYIRYSDGKFHFTTIDESIKRD
EEEEEEEEECCEEEEEECCHHHCCC
>Mature Secondary Structure
MIKAQLKNLIKTIHLVKEAGFSLNGSLYMELLHDFTHDELVHNPIIESTVDTIQSVEFER
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCEEE
VSFSYNGKDNVINDISFSIKAGERLAIVGGNGSGKSTIFKLACGLYDNYEGNIYINGINL
EEEEECCCCCEECCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEE
CSIQKKSYYKRISALFQDFLKYELTLRENVGLGELSKLYSDESYNTSFFTTSWDSENELR
EEEHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEE
LEDIYIRYSDGKFHFTTIDESIKRD
EEEEEEEEECCEEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1539969; 1735728 [H]