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The map label for this gene is yfmR [H]

Identifier: 15674895

GI number: 15674895

Start: 715227

End: 717104

Strand: Direct

Name: yfmR [H]

Synonym: SPy_0867

Alternate gene names: 15674895

Gene position: 715227-717104 (Clockwise)

Preceding gene: 15674894

Following gene: 15674896

Centisome position: 38.61

GC content: 38.82

Gene sequence:

>1878_bases
ATGAGCCATTTTTTGGTGGAGAAATTAACAAAAACGGTGGGAGATAAGACCGTCTTTCAAGATATTTCCTTTATTATTCA
TGACTTTGACCGTATTGGGATTATTGGGGTTAATGGAACAGGAAAAACAACTCTTTTAGATGTGTTGTCGGGAAGGCTTG
GTTTTGACGGAGATCATTCACCATTTTCTAAAGCCAATGATTACAAAATCGCTTACTTAACACAAGACCCTGAATTTAAC
GATGCAGCTTCTGTTTTAGATACGGTATTATCAGCTGATGTTAAAGCTATTCAACTGATTCGTCAGTACGAACTATTGAT
GGCGAATTATACTGAGGATAAACAAGAAAGCTTAGAGTCCCTCATGTCTGAAATGGATCGATTAGATGCTTGGTCTATTG
AAAGTGATGTCAAAACAGTCCTATCAAAATTAGGCATCACGGATTTGGAACAAAAAGTGGGAGACCTATCAGGTGGTATG
AGAAGACGTGTCCAGTTAGCTCAAGTGTTGCTAGGAGCTGCTGACTTACTCTTGTTGGATGAGCCGACCAACCATCTCGA
TATTGACACCATCGCTTGGTTAACAACCTATCTCAAGACAGCTAAAAAAACCGTCCTTTTTATTACCCATGACCGTTATT
TCCTTGATCATGTGGCTACCCGTATTTTTGAATTGGATAAAGCGGGACTGACAGAATATCAAGGCAATTACCAAGACTAT
GTGCGCTTAAAAGCAGAACAAGACGAACGAGATGCTGCTAATTTACACAAGAAGAAGCAACTCTATAAACAAGAATTAGC
CTGGATGAGGACGCAACCACAGGCGCGTGCAACCAAACAGCAGGCTAGAATCAATCGTTTCAGTGACTTGAAAAAAGAAG
TTCACCAAGACAGTTCTGCGGATAAATTGGAGATGACTTTCGAAACGAGCCGAATTGGGAAGAAGGTGATTCACTTTGAA
GACCTTTCTTTTGCTTATGGCGACCGACAGTTGATTAAGGATTTTAACTTGATTATTCAAAATAAAGATCGTATTGGAAT
TGTTGGAGATAACGGCGTCGGAAAATCTACCCTGTTAAATATCATTAACGGTGATCTCAAACCAACTTCTGGGAAGCTTG
ATATTGGAGATACTATTCGTGTAGGTTATTTCTCTCAGCAGCTCAAAGATATGGATGAGACCAAACGGGTCATTAATTAC
CTTCAAGAAGTGGCTGATGAGGTTAAAACAAGTGTGGGAACAACGAGTATCAGTGAGCTTTTAGAACAATTTCTTTTTCC
GAGATCAAGTCATGGCACGCTGATTGCTAAATTATCTGGTGGGGAGAAAAAACGGCTCTACTTGCTAAAACTGCTCATTG
AAAAGCCAAATGTTCTTCTCCTTGATGAGCCAACAAATGATTTAGACATTGCCACCTTGAAGGTCTTAGAAAACTTTTTA
GCTAACTTTGCAGGACCAGTCATTACGGTTAGTCACGATCGTTATTTCCTAGACAAAGTAGCTACTAAGATTTTAGCCTT
TGAAGAAGGCGATATTCGTGTTTTTTATGGCAATTACAGTGATTACCTTGATGAAAAAGTTTTTGAAAAAGAAACAGTTG
AGGCAGACTTAGCTAAAACAACAGTCACTGAAGAAGTGCCACTTCCTCAAAAAGAGGAAAGAAAGCGCATGTCCTACCTT
GAAAAACAAGAATGGGCTCAGATAGAAGATAAAATAGCAACTATTGAGGCTAATATTGAAGAAATTGAAAACCAAATGTT
AACTGTAGTTAGTGATTATGGCCAGTTAGCTCAATTACAAAAGGAACTCGATCAGCGCAATAATGATTTATTATTGGCGT
ATGAACGGTTTGAGTATTTGAGTGGACTAGACATATAA

Upstream 100 bases:

>100_bases
TAGGGCTTATGCTTGAGAAAGTTGAATTAGCGATTGTAGAGGGGCGCCTAGATAATGATTTCACTACAATTGAAGCATTT
GTTAGAGAGGAATTAGCAAC

Downstream 100 bases:

>100_bases
GTATACTATGGTAATGTTATGTTTATAATAAACAAGTGATAATAGAAAAGAAGGGCTCTTGCACTGAGCCCCAAAAGTTG
GCTACTCTATTTGAAGTAAA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFN
DAASVLDTVLSADVKAIQLIRQYELLMANYTEDKQESLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGM
RRRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFSDLKKEVHQDSSADKLEMTFETSRIGKKVIHFE
DLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINY
LQEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLKVLENFL
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKVFEKETVEADLAKTTVTEEVPLPQKEERKRMSYL
EKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI

Sequences:

>Translated_625_residues
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFN
DAASVLDTVLSADVKAIQLIRQYELLMANYTEDKQESLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGM
RRRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFSDLKKEVHQDSSADKLEMTFETSRIGKKVIHFE
DLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINY
LQEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLKVLENFL
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKVFEKETVEADLAKTTVTEEVPLPQKEERKRMSYL
EKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI
>Mature_624_residues
SHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFND
AASVLDTVLSADVKAIQLIRQYELLMANYTEDKQESLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMR
RRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDYV
RLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFSDLKKEVHQDSSADKLEMTFETSRIGKKVIHFED
LSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYL
QEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLKVLENFLA
NFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKVFEKETVEADLAKTTVTEEVPLPQKEERKRMSYLE
KQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=543, Percent_Identity=29.8342541436464, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI10947135, Length=555, Percent_Identity=30.0900900900901, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI69354671, Length=555, Percent_Identity=30.0900900900901, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=29.981718464351, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=29.981718464351, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI157502201, Length=268, Percent_Identity=25.7462686567164, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI157502203, Length=268, Percent_Identity=25.7462686567164, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4505771, Length=269, Percent_Identity=27.8810408921933, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI9961252, Length=269, Percent_Identity=27.8810408921933, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI9961250, Length=269, Percent_Identity=27.8810408921933, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=550, Percent_Identity=35.8181818181818, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1787182, Length=629, Percent_Identity=32.2734499205087, Blast_Score=306, Evalue=3e-84,
Organism=Escherichia coli, GI1789751, Length=598, Percent_Identity=30.2675585284281, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=33.1460674157303, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI87081782, Length=543, Percent_Identity=23.2044198895028, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI48994943, Length=482, Percent_Identity=23.0290456431535, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=26.5, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI48994883, Length=235, Percent_Identity=28.0851063829787, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI145693107, Length=506, Percent_Identity=22.7272727272727, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=27.9475982532751, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786698, Length=167, Percent_Identity=31.1377245508982, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=27.979274611399, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1788053, Length=197, Percent_Identity=26.3959390862944, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786253, Length=232, Percent_Identity=24.5689655172414, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=546, Percent_Identity=30.4029304029304, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=548, Percent_Identity=28.1021897810219, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=30.6691449814126, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI193211017, Length=274, Percent_Identity=25.1824817518248, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=274, Percent_Identity=25.1824817518248, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=274, Percent_Identity=25.1824817518248, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=241, Percent_Identity=26.9709543568465, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=331, Percent_Identity=23.5649546827795, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=32.3970037453184, Blast_Score=227, Evalue=5e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=520, Percent_Identity=32.8846153846154, Blast_Score=223, Evalue=9e-59,
Organism=Saccharomyces cerevisiae, GI6323278, Length=365, Percent_Identity=27.6712328767123, Blast_Score=133, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=365, Percent_Identity=25.4794520547945, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=378, Percent_Identity=26.4550264550265, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24641342, Length=550, Percent_Identity=29.4545454545455, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=30.7692307692308, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24642252, Length=541, Percent_Identity=31.2384473197782, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI18859989, Length=541, Percent_Identity=31.2384473197782, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24581191, Length=193, Percent_Identity=31.6062176165803, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581189, Length=193, Percent_Identity=31.6062176165803, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581193, Length=193, Percent_Identity=31.6062176165803, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581195, Length=193, Percent_Identity=31.6062176165803, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71192; Mature: 71061

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHS
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
PFSKANDYKIAYLTQDPEFNDAASVLDTVLSADVKAIQLIRQYELLMANYTEDKQESLES
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMRRRVQLAQVLLGAADLLLLD
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEEE
EPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFSDLKKEVHQDSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKLEMTFETSRIGKKVIHFEDLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLN
CCEEEEEEHHHHHHHHEEEECCCHHCCCHHHHHHHHHHEECCCCEEEECCCCCCHHHHHH
IINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYLQEVADEVKTSVGTTSISEL
HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLKVLENFL
HHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKVFEKETVEADLAKT
HHHCCCEEEEECCHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TVTEEVPLPQKEERKRMSYLEKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDQRNNDLLLAYERFEYLSGLDI
HHHHCCCCCEEEEEHHHHHHCCCCC
>Mature Secondary Structure 
SHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHS
CHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
PFSKANDYKIAYLTQDPEFNDAASVLDTVLSADVKAIQLIRQYELLMANYTEDKQESLES
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMRRRVQLAQVLLGAADLLLLD
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEEE
EPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFSDLKKEVHQDSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKLEMTFETSRIGKKVIHFEDLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLN
CCEEEEEEHHHHHHHHEEEECCCHHCCCHHHHHHHHHHEECCCCEEEECCCCCCHHHHHH
IINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYLQEVADEVKTSVGTTSISEL
HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLKVLENFL
HHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKVFEKETVEADLAKT
HHHCCCEEEEECCHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TVTEEVPLPQKEERKRMSYLEKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDQRNNDLLLAYERFEYLSGLDI
HHHHCCCCCEEEEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]