Click here to switch to the map view.

The map label for this gene is ribU [H]

Identifier: 15674521

GI number: 15674521

Start: 319388

End: 319951

Strand: Direct

Name: ribU [H]

Synonym: SPy_0373

Alternate gene names: 15674521

Gene position: 319388-319951 (Clockwise)

Preceding gene: 15674520

Following gene: 15674522

Centisome position: 17.24

GC content: 30.85

Gene sequence:

>564_bases
ATGTCAAAAACACATAAAATGATTATGATTGGTATACTTTCTGCGATATCATTTCTATTGATGCTAGTTAGCTTTGCCAT
TATTCCAGGCGCAGCTTTTTTAAAAATTGAATTTAGTATTATTCCTGTTTTATTTGGTTTAATGATTATGGACTTAAAGA
GTGCTTACTTAATTTTGTTATTGAGGTCCTTATTGAAACTCTTTTTGAACAATCGTGGGGTTAATGATTTTATTGGTCTC
CCAATGAATATTATCGCTATCGCTTTATTTGTGACGGCTTTTGCCTTAGTTTGGAACCGTCAAAAAACGCTTAGTCAATA
TGTATTTGCTAGCTTACTAGGCACAGGGTTATTAACGTTTGGCATGGTTGTTCTTAATTATACTTTTGCCATTCCTTTAT
ATGCTATATTTGCAAATATTGATATCAGAGCTTATATTGGTGTTACTAAGTATATGATGACTATGGTTATTCCGTTTAAT
CTTGTTGAAGGGTTGATATTTGCAATTACCTTTTATTTTGTGTATATTGCAAGTAAACCAATTTTAGAAAGATACTTACA
CTAA

Upstream 100 bases:

>100_bases
GTCTGGATGAGAGAAGACCGGGCTTTTTGTGTAGGCTTATTTTAGCTACACAATAACGACGGAACTTCTTTCAATTTGAA
AAAATTGGAGGAATTTTTTA

Downstream 100 bases:

>100_bases
TATGATGACAAACAAACAAACTCACTTTTTAATAGCTTCTTTTGCATTGCTAATCTTTGTTATAATAGGCTATACGGTCA
AATTTTTTCCTGAACGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSKTHKMIMIGILSAISFLLMLVSFAIIPGAAFLKIEFSIIPVLFGLMIMDLKSAYLILLLRSLLKLFLNNRGVNDFIGL
PMNIIAIALFVTAFALVWNRQKTLSQYVFASLLGTGLLTFGMVVLNYTFAIPLYAIFANIDIRAYIGVTKYMMTMVIPFN
LVEGLIFAITFYFVYIASKPILERYLH

Sequences:

>Translated_187_residues
MSKTHKMIMIGILSAISFLLMLVSFAIIPGAAFLKIEFSIIPVLFGLMIMDLKSAYLILLLRSLLKLFLNNRGVNDFIGL
PMNIIAIALFVTAFALVWNRQKTLSQYVFASLLGTGLLTFGMVVLNYTFAIPLYAIFANIDIRAYIGVTKYMMTMVIPFN
LVEGLIFAITFYFVYIASKPILERYLH
>Mature_186_residues
SKTHKMIMIGILSAISFLLMLVSFAIIPGAAFLKIEFSIIPVLFGLMIMDLKSAYLILLLRSLLKLFLNNRGVNDFIGLP
MNIIAIALFVTAFALVWNRQKTLSQYVFASLLGTGLLTFGMVVLNYTFAIPLYAIFANIDIRAYIGVTKYMMTMVIPFNL
VEGLIFAITFYFVYIASKPILERYLH

Specific function: Mediates riboflavin uptake, probably via a facilitated diffusion mechanism. May also transport FMN and roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21085; Mature: 20954

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTHKMIMIGILSAISFLLMLVSFAIIPGAAFLKIEFSIIPVLFGLMIMDLKSAYLILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLFLNNRGVNDFIGLPMNIIAIALFVTAFALVWNRQKTLSQYVFASLLGTGLLTF
HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMVVLNYTFAIPLYAIFANIDIRAYIGVTKYMMTMVIPFNLVEGLIFAITFYFVYIASKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ILERYLH
HHHHHCC
>Mature Secondary Structure 
SKTHKMIMIGILSAISFLLMLVSFAIIPGAAFLKIEFSIIPVLFGLMIMDLKSAYLILL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLFLNNRGVNDFIGLPMNIIAIALFVTAFALVWNRQKTLSQYVFASLLGTGLLTF
HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMVVLNYTFAIPLYAIFANIDIRAYIGVTKYMMTMVIPFNLVEGLIFAITFYFVYIASKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ILERYLH
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA