Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is atoD.2 [H]
Identifier: 15674352
GI number: 15674352
Start: 130132
End: 130791
Strand: Direct
Name: atoD.2 [H]
Synonym: SPy_0141
Alternate gene names: 15674352
Gene position: 130132-130791 (Clockwise)
Preceding gene: 15674351
Following gene: 15674353
Centisome position: 7.02
GC content: 39.85
Gene sequence:
>660_bases ATGAAAGAGAATAAAAGAATAGCAATAGCAGAAGCTATCAGTCATATTAAAGATGGTGACACGATTATGGTCGGTGGTTT TATGGCTAATGGAACACCAGAAGCGTTAATTGATGCACTGGTTGACAAAGGCACAAAAGACTTAACCTTGATCTGTAATG ATGCTGGTTTTGTTGATCGCGGTGTTGGAAAAATGGTGGCTAATCATCAATTCAAAACCATTTATGCAACACATATTGGA TTAAATAAAGAAGCTGGGCGCCAAATGACTGCCGGTGAAACGACGATTGAGCTCATTCCTCAAGGAACCTTCGCCGAAAA AATTCGCATCGGAGCTTATGGCATTGGTGGCTTTTACACGCCAACAGGGGTAGGAACCTTAGTGGCAGAAGGCAAGGAAA CAAAAACCATCAAGGGAAAAACCTATCTCTTAGAATACCCATTTGAGGCAGATGTCGCCTTGATATTTGCTAATCAAGCT GATGAAATGGGAAATTTACAGTATAGTGGTTCTGAAAATAATTTTAATCAATTGATGGCAGCTTGTGCAAAAACAACAAT TGTTCAGGCGCGAGAAATAGTACCAGTCGGCACCATACAACCAGAATGCGTTCATACACCACATATTTTTGTAGATTACA TTGTTAAAGAAGGAGTATAG
Upstream 100 bases:
>100_bases CAGAAATGGCTAAGCGTGATGTGAGACATGGCTTAGCAACGCTTTGTATTGGTGGTGGCCAAGGTCAAAGTATCATCGTA ACAAGATAGAAGGTAACCGT
Downstream 100 bases:
>100_bases TTATGGCGGTTGCATTAAGTAAAGAAGAGATTCAAAATCGTATTGCAAAGCGTGTGGCCAAAGAATTAGAAGATGGTACT TTGGTAAATTTAGGTATTGG
Product: putative acetyl-CoA:acetoacetyl-CoA transferase subunit alpha
Products: NA
Alternate protein names: Acetyl-CoA:acetoacetate-CoA transferase subunit alpha [H]
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDRGVGKMVANHQFKTIYATHIG LNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYTPTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANQA DEMGNLQYSGSENNFNQLMAACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV
Sequences:
>Translated_219_residues MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDRGVGKMVANHQFKTIYATHIG LNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYTPTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANQA DEMGNLQYSGSENNFNQLMAACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV >Mature_219_residues MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDRGVGKMVANHQFKTIYATHIG LNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYTPTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANQA DEMGNLQYSGSENNFNQLMAACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV
Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]
COG id: COG1788
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]
Homologues:
Organism=Homo sapiens, GI4557817, Length=224, Percent_Identity=41.0714285714286, Blast_Score=175, Evalue=3e-44, Organism=Homo sapiens, GI11545841, Length=224, Percent_Identity=40.1785714285714, Blast_Score=154, Evalue=4e-38, Organism=Escherichia coli, GI1788551, Length=213, Percent_Identity=49.2957746478873, Blast_Score=225, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17531517, Length=225, Percent_Identity=38.6666666666667, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI21358325, Length=224, Percent_Identity=39.2857142857143, Blast_Score=170, Evalue=5e-43, Organism=Drosophila melanogaster, GI24655794, Length=224, Percent_Identity=39.2857142857143, Blast_Score=170, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012792 - InterPro: IPR004165 - InterPro: IPR004163 [H]
Pfam domain/function: PF01144 CoA_trans [H]
EC number: =2.8.3.8 [H]
Molecular weight: Translated: 23602; Mature: 23602
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS01273 COA_TRANSF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDR CCCCCEEHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCHH GVGKMVANHQFKTIYATHIGLNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYT CHHHHHHCCCEEEEEEEECCCCHHHCCEEECCCCEEEEECCCCCHHEEEEEEEECCCEEC PTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANQADEMGNLQYSGSENNFNQLMA CCCCEEEEECCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCHHHHHH ACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV HHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDR CCCCCEEHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCHH GVGKMVANHQFKTIYATHIGLNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYT CHHHHHHCCCEEEEEEEECCCCHHHCCEEECCCCEEEEECCCCCHHEEEEEEEECCCEEC PTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANQADEMGNLQYSGSENNFNQLMA CCCCEEEEECCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCHHHHHH ACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV HHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]