Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is atoE [H]
Identifier: 15674350
GI number: 15674350
Start: 126461
End: 127837
Strand: Direct
Name: atoE [H]
Synonym: SPy_0137
Alternate gene names: 15674350
Gene position: 126461-127837 (Clockwise)
Preceding gene: 15674348
Following gene: 15674351
Centisome position: 6.83
GC content: 40.16
Gene sequence:
>1377_bases ATGGATCGCTATATTGATGGCTTTATGAAATGGATGCCAGAATCGCTTTTTATCTGTTTTATTTTAACCTTTTTAGTCGT TACTATGTCTGTGTTGATGACGGATAGTCCCTTTATTGGTACGGAAAAGACGGGCGGGATTATCTATGGCTGGGTAAATG GTTTTTGGGGGCTGTTGTCCTTTGCCATGCAGATGACTATTTTACTTGCGACAGGGAATGCTGTAGCGAGTTCTCCACCT GCTCATAAGATGTTTAAGTCCCTTGCCAAACTGCCTCAAACCAGGACTCAGATTTTTATCTTTTCCATTGTAGTAGGCTC TATCTTTGGCTTTTTACACTGGGGTCTTGGTATGATGGTTGCTATTGTGTTTGGGAAAGAGTTGCTTGTTCAGGCTAGGC AAAAAGGGATTAAGGTGCATACGCCTTTGTTTGTTGCTACTTTATTTTTTACCTTTTTACCAGCTACTTCTGGTCTATCT GGTGCTGCGGTGCTTTATTCGGCTACTCCAGATTATTTGCGAAATAGTGTCGCAGATGCTTATAAACAGGTTGTTCCTGA AAGTGTTCCTCTGACAGAATCAGTTTTGAATCTTCCATTTATCAGTCTTTTAGTGGTGTGTATGCTGGTACCGCTTTGCT TTGCTTTATTGGCGCACCCAAAAGATGAAACTAAAATCATGGAACTTGATGATGAGATCTATCACCATAGTCTTGATACC GCTTCACATGTTGTTATTGCAAGAAACACACCTGCTGAAAAGATGAACGCATCTCGCTTAGTGATGTATCTTGTTGGTGG GGCCATTGTTAGCTATAGCCTTTATCATTTTTCGGTGGTGGGCTTGTCTGGTCTAGATCTCAATTGTTTTAACTTTTTAT TTTTAGGCTTAGGCTTGCTTCTTTGTGGTCAACAAGGACCAGAATATTATGGTTCCTTATTCAAAGATGGGGTCATGTCA TCTTGGGGCTTGGTGCTTCAGTTTCCATTTTACGCTGGTATTTTTGGAATCATTCAAAGTACAGGTTTAGGATTAGAGAT TTCCCATTTCTTTGTCGCTATTTCAAATGGGACAACATGGCCGGTCTTTGCTTATCTTTACTCGGCTTTGCTGAATATTG CGGTACCATCAGGAGGCTCAAAATTTGTGATTGAAGCTCCCTATATCGTCCCTGCAACTATCGAAGTTGGTAATGACTTA GGTAAGATTTTGCAGGCTTATCAATTAGGAGATGCCACAACAAACTTGATAGTTCCTTTTTGGGCCTTATCTTACCTCTC AAACTTCAAACTAAAATTCAATCAAATTGTGGCTTATACTATTCCTTGTGTCTTGGTGGTCACAGGTATTGCCATCATTT ACCTATTTGTATTTTAG
Upstream 100 bases:
>100_bases TAATATTATCGACAGGTTACTGGTCAAAAGAACAAAAGTGCTTTTGGACAATGTGAAAGGAATTGACAACATGAATAACA TCAAAACCAAAAAAAGGTTT
Downstream 100 bases:
>100_bases GAAATAACTACATGAAACGCTTGGGATTGTTTCCTTCAGGCGTTTTTTTAAGGTCTGAGTCCAGCAATTAGAAGCGCTGG TTCATGAAATAATCTAAGAT
Product: putative short-chain fatty acids transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLATGNAVASSPP AHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLS GAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDT ASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYYGSLFKDGVMS SWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDL GKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
Sequences:
>Translated_458_residues MDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLATGNAVASSPP AHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLS GAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDT ASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYYGSLFKDGVMS SWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDL GKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF >Mature_458_residues MDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLATGNAVASSPP AHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLS GAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDT ASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYYGSLFKDGVMS SWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDL GKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
Specific function: Responsible for the intake of short-chain fatty acids [H]
COG id: COG2031
COG function: function code I; Short chain fatty acids transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788553, Length=461, Percent_Identity=30.1518438177874, Blast_Score=207, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006161 - InterPro: IPR006160 [H]
Pfam domain/function: PF02667 SCFA_trans [H]
EC number: NA
Molecular weight: Translated: 50207; Mature: 50207
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH FAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMV HHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATPDYLRNSVADA HHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHH YKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDT HHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCC ASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLL CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH LCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTW HHCCCCHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH PVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLGDATTNLIVPF HHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHCHHHHHHHHHHHCCCCHHHHHHHH WALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH FAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMV HHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATPDYLRNSVADA HHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHH YKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDT HHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCC ASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLL CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH LCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTW HHCCCCHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH PVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLGDATTNLIVPF HHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHCHHHHHHHHHHHCCCCHHHHHHHH WALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]