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The map label for this gene is secY [H]

Identifier: 15674307

GI number: 15674307

Start: 73724

End: 75028

Strand: Direct

Name: secY [H]

Synonym: SPy_0073

Alternate gene names: 15674307

Gene position: 73724-75028 (Clockwise)

Preceding gene: 15674306

Following gene: 15674308

Centisome position: 3.98

GC content: 36.4

Gene sequence:

>1305_bases
ATGTTCTTAAAAATACTAAAAGACGCGTTAAAGATAAAGACTGTACGGAATAAAATTTTCTTTACTATATTTATCATTCT
TGTATTCCGAATTGGGACACATATTACCGTACCTGGTGTAAATGCCAAGAGCTTAGAGCAATTAAGTGAACTCCCTTTCT
TAAATATGTTAAACTTAGTTAGTGGTAATGCGATGAGAAATTTCTCAGTATTTTCAATGGGGGTTAGCCCATATATTACT
GCTTCTATCGTTGTTCAGTTATTGCAGATGGATATTTTACCTAAGTTTGTTGAGTGGGGCAAACAAGGTGAGGTTGGACG
TCGTAAATTAAATCAAGCGACGCGCTATATTTCACTTGTTTTGGCTTTTGCCCAATCCATTGGTATCACTGCAGGGTTTA
ATACTTTGTCGAACGTTGCACTTGTTAAGACACCAGACATCAAAACATATTTACTGATCGGGGCATTACTGACAACAGGT
AGCGTTATTGTTACCTGGCTTGGAGAACAAATCACAGATAAAGGATTTGGTAATGGCGTATCAATGATTATCTTTGCGGG
TATTATTTCGTCTATTCCAAGTGCAATTGCAACAATTCGTGAAGACTATTTTGTAAATGTTAAGGCAAGTGATTTACACT
CGTCTTATCTCATTGTTGGGATTTTAATCATAGCTGTTCTTGCTATTGTTTTCTTTACAACATATGTCCAACAAGCGGAA
TATAAAATTCCAATCCAATACACAAAGCTAATGCAAGGTGCACCTACAAGTTCATATCTTCCATTAAAAGTAAATCCAGC
CGGCGTTATTCCCGTTATCTTTGCTAGCTCGATTACAACTATCCCAAGTACGATTATTCCTTTTGTTCAAAATGGTAGAG
ATTTACCGTGGTTAAACCGTTTGCAAGAAATTTTTAATTATCAAACTCCAGTCGGAATGATAGTTTACGCCTTGTTGATT
ATATTGTTCTCATTCTTCTATACCTTTGTACAAGTTAATCCTGAGAAGACAGCAGAAAATCTTCAGAAGAATTCCTCATA
TATACCAAGTGTTCGCCCTGGACGTGAGACAGAACAATTTATGTCCGCATTGCTAAAAAAACTAGCAACCGTAGGAGCTA
TCTTCTTAGCATTTATCTCTTTAGCGCCAATAGCAGCACAACAAGCTCTCAACCTTTCTTCTAGTATTGCTTTAGGTGGA
ACTAGTTTGCTCATTTTGATTTCAACTGGTATCGAAGGTATGAAACAGCTTGAGGGATATCTTCTAAAGAGAAAATATGT
CGGATTTATGAATACAGCAGAATAG

Upstream 100 bases:

>100_bases
AAATTGACTGTAAAAGCAGCTAAGTTCTCAAAATCTGCTGAAGCAGCTATTATTGCTAAAGGTGGTTCAATCGAAGTCAT
CTAATGAGGGGATACTCATT

Downstream 100 bases:

>100_bases
AATACAGGTTGACATTGTCAACCTTCTATTTTGTTTTTAAATGACAATAAGACTTGGTTATCATCAAACGATTTCTTGTT
GCCATTTGAAAACAAAAACC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE
YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE

Sequences:

>Translated_434_residues
MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE
YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE
>Mature_434_residues
MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE
YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=420, Percent_Identity=39.0476190476191, Blast_Score=257, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47693; Mature: 47693

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH
SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV
HHHHHHHCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
SMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNR
CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LQEIFNYQTPVGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
MSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEHHCHHHHHHHHHH
LLKRKYVGFMNTAE
HHHHHHHCCCCCCC
>Mature Secondary Structure
MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH
SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV
HHHHHHHCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
SMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNR
CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LQEIFNYQTPVGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
MSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEHHCHHHHHHHHHH
LLKRKYVGFMNTAE
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]