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The map label for this gene is ysjB

Identifier: 15673805

GI number: 15673805

Start: 1891913

End: 1892830

Strand: Reverse

Name: ysjB

Synonym: L75267

Alternate gene names: 15673805

Gene position: 1892830-1891913 (Counterclockwise)

Preceding gene: 15673806

Following gene: 15673804

Centisome position: 80.02

GC content: 34.97

Gene sequence:

>918_bases
ATGATTATTGGAGTCATTGGGGCAACATCAAATATTGCAAATAAGGCTTATTTACCAGTTTATGCGAAAATGCAGGCGGA
CCATCGTTTTATTTTGTATTCTCGTCAGTGGGAAAAAGCTGAAGAAGTTCGCAAACATTATAAATTTGAATATGCGACAG
AGGACTTGTCAGCACTAGAAACTGTGGATTTGGTTATTATTCATGCGGCAACTTCCCAACATTTTGAGTTAGCTAAAAGA
TATTTGTCAGCGGGAGTTCCTGTTTTAATGGATAAACCTGTTTCAGAAAAATTAGCCGAAGTAAAAGAATTGCAAAAAAT
TGCTGACCAAAATAATACTTTATTGGTCGTCGCTTTTAATCGCAGATTTGCACCACAAACAGCTAAATTAAAAGCTCTCC
CAGATAAAAATATGGTGAAAGTAAGTAAAAATTTAGCAAATTCTGCCAGTGAAAAAATGACATTTTTAATGTACGATATT
TTTATTCACCCTCTGGACACCTTGATTTATTTGCTAGATGATGAGATTTTAGAAGTCAATTATTCATTAAAGAAGAATCA
AGACGGGCAATTAACAAGAGCAATTGTTATGCTAGAAACAGCGACAACGAGTGGAATTGCCACAATGAACTTAGAAGCTG
GTGCCTTTACTGAAGAATTTACAGTAGAAAGTCCTAGAGAAAGCCTTCGCTTGTCAGAACTGTGCGAACTTGAAAAATTT
ACAGGAATTGACCGTCAAAAATTTGGAATAAGTGGTTGGCAAAGTGCGACATACAATCGTGGTTTTGATGAAATTATTTC
TGCCATGGTTCTAGCGGTTGAAAAATTTGATGGTCAAAATCGTCAAGAATTACTGACAGAACTTAAACAAGAAAATATTC
TAAAATCCCACGAAATCATTGACCAAATGTTAAAATGA

Upstream 100 bases:

>100_bases
CAAATGAAAGTTTCATTCAATCAGGGAATGGTCATTGTAATTTATTCAGGTGATTCGCATAAAAAATAAACAATAAGAGG
TTAAGGAGAACGGAAAAAGT

Downstream 100 bases:

>100_bases
AAAGTTACTGACAGAAATATTAGCATATCTGTAAACTGCTAAAGCAGTCACAGCTATCCTATGACAGAAATATTAGACTA
TCTTAAAAATACTGACAGAG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIIGVIGATSNIANKAYLPVYAKMQADHRFILYSRQWEKAEEVRKHYKFEYATEDLSALETVDLVIIHAATSQHFELAKR
YLSAGVPVLMDKPVSEKLAEVKELQKIADQNNTLLVVAFNRRFAPQTAKLKALPDKNMVKVSKNLANSASEKMTFLMYDI
FIHPLDTLIYLLDDEILEVNYSLKKNQDGQLTRAIVMLETATTSGIATMNLEAGAFTEEFTVESPRESLRLSELCELEKF
TGIDRQKFGISGWQSATYNRGFDEIISAMVLAVEKFDGQNRQELLTELKQENILKSHEIIDQMLK

Sequences:

>Translated_305_residues
MIIGVIGATSNIANKAYLPVYAKMQADHRFILYSRQWEKAEEVRKHYKFEYATEDLSALETVDLVIIHAATSQHFELAKR
YLSAGVPVLMDKPVSEKLAEVKELQKIADQNNTLLVVAFNRRFAPQTAKLKALPDKNMVKVSKNLANSASEKMTFLMYDI
FIHPLDTLIYLLDDEILEVNYSLKKNQDGQLTRAIVMLETATTSGIATMNLEAGAFTEEFTVESPRESLRLSELCELEKF
TGIDRQKFGISGWQSATYNRGFDEIISAMVLAVEKFDGQNRQELLTELKQENILKSHEIIDQMLK
>Mature_305_residues
MIIGVIGATSNIANKAYLPVYAKMQADHRFILYSRQWEKAEEVRKHYKFEYATEDLSALETVDLVIIHAATSQHFELAKR
YLSAGVPVLMDKPVSEKLAEVKELQKIADQNNTLLVVAFNRRFAPQTAKLKALPDKNMVKVSKNLANSASEKMTFLMYDI
FIHPLDTLIYLLDDEILEVNYSLKKNQDGQLTRAIVMLETATTSGIATMNLEAGAFTEEFTVESPRESLRLSELCELEKF
TGIDRQKFGISGWQSATYNRGFDEIISAMVLAVEKFDGQNRQELLTELKQENILKSHEIIDQMLK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium mviM [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=262, Percent_Identity=28.6259541984733, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 34663; Mature: 34663

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGVIGATSNIANKAYLPVYAKMQADHRFILYSRQWEKAEEVRKHYKFEYATEDLSALE
CEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHH
TVDLVIIHAATSQHFELAKRYLSAGVPVLMDKPVSEKLAEVKELQKIADQNNTLLVVAFN
HEEEEEEEECCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
RRFAPQTAKLKALPDKNMVKVSKNLANSASEKMTFLMYDIFIHPLDTLIYLLDDEILEVN
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
YSLKKNQDGQLTRAIVMLETATTSGIATMNLEAGAFTEEFTVESPRESLRLSELCELEKF
EEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TGIDRQKFGISGWQSATYNRGFDEIISAMVLAVEKFDGQNRQELLTELKQENILKSHEII
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DQMLK
HHHHC
>Mature Secondary Structure
MIIGVIGATSNIANKAYLPVYAKMQADHRFILYSRQWEKAEEVRKHYKFEYATEDLSALE
CEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHH
TVDLVIIHAATSQHFELAKRYLSAGVPVLMDKPVSEKLAEVKELQKIADQNNTLLVVAFN
HEEEEEEEECCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
RRFAPQTAKLKALPDKNMVKVSKNLANSASEKMTFLMYDIFIHPLDTLIYLLDDEILEVN
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
YSLKKNQDGQLTRAIVMLETATTSGIATMNLEAGAFTEEFTVESPRESLRLSELCELEKF
EEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TGIDRQKFGISGWQSATYNRGFDEIISAMVLAVEKFDGQNRQELLTELKQENILKSHEII
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DQMLK
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]