Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ysiE
Identifier: 15673801
GI number: 15673801
Start: 1888525
End: 1889163
Strand: Reverse
Name: ysiE
Synonym: L71879
Alternate gene names: NA
Gene position: 1889163-1888525 (Counterclockwise)
Preceding gene: 15673804
Following gene: 15673800
Centisome position: 79.86
GC content: 33.18
Gene sequence:
>639_bases ATGATTACTTCACTTACGATTCTTTCAAGTCTTGCAATAATTGTAACCGCAGTTATTGCTTTTGCGGAATATCAAGCTGG AAAAAGACGTCATTCAACCACTCTATCTATCGAAATGCTTCATAAGCAAAAAGACGATTTTATTAAATGGTTTTATGATT ATCTTCATATCTCACAAGTGTTGATGCGAGTAACAATTCAACTTAACATGGACCGCTTAGAACAACGTCATTTTGAAAGT ACAAATGACTCTAGTAATCAGCGACGCATTATTCGTATTAATGAGAATACGATGTCAAGAGATCGTAATGCAGCAGATTT AAATTATCAAATGATGCTTTTAAATCTGGTGATTGATGACCGTAAGCCTTATTTTGAAAATACTCAGATCAAGGTCCGCT CAAATTTTGAAACATTGATGCATGACATCAATGAATTTACAAGAAAAATTCATATAGAATATGATGAAAAAATGAAAGAA ACGGATGATGCAGGTTGCCGTTCCATTATGAATGAAGCTCGAAAGATGGCTAGAAATACGATGGAAACTATCGAAAAATC TAACCATGAAATGGGTGAGCAAGTCAAACATGATATTCAAGCACTCGAAGATGAAGTAGAACATTATTTTAAAAAATAA
Upstream 100 bases:
>100_bases GTTTCACCATGTCTTACTAAATATAATTTCATAGTCAGATTATACCATTTAACGTAGCCAAAGTTAAGAGATAGCTTGCC ATTCGTGGTATAATAAGAGT
Downstream 100 bases:
>100_bases AAAAACATGAATATACACCTTCACTATGGAGAAGACACCAATATCTGCAATCAAAACAAAATAATAAAAGGAAAATAAAT GCCACAAGATAAAATAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MITSLTILSSLAIIVTAVIAFAEYQAGKRRHSTTLSIEMLHKQKDDFIKWFYDYLHISQVLMRVTIQLNMDRLEQRHFES TNDSSNQRRIIRINENTMSRDRNAADLNYQMMLLNLVIDDRKPYFENTQIKVRSNFETLMHDINEFTRKIHIEYDEKMKE TDDAGCRSIMNEARKMARNTMETIEKSNHEMGEQVKHDIQALEDEVEHYFKK
Sequences:
>Translated_212_residues MITSLTILSSLAIIVTAVIAFAEYQAGKRRHSTTLSIEMLHKQKDDFIKWFYDYLHISQVLMRVTIQLNMDRLEQRHFES TNDSSNQRRIIRINENTMSRDRNAADLNYQMMLLNLVIDDRKPYFENTQIKVRSNFETLMHDINEFTRKIHIEYDEKMKE TDDAGCRSIMNEARKMARNTMETIEKSNHEMGEQVKHDIQALEDEVEHYFKK >Mature_212_residues MITSLTILSSLAIIVTAVIAFAEYQAGKRRHSTTLSIEMLHKQKDDFIKWFYDYLHISQVLMRVTIQLNMDRLEQRHFES TNDSSNQRRIIRINENTMSRDRNAADLNYQMMLLNLVIDDRKPYFENTQIKVRSNFETLMHDINEFTRKIHIEYDEKMKE TDDAGCRSIMNEARKMARNTMETIEKSNHEMGEQVKHDIQALEDEVEHYFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25270; Mature: 25270
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSLTILSSLAIIVTAVIAFAEYQAGKRRHSTTLSIEMLHKQKDDFIKWFYDYLHISQV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRVTIQLNMDRLEQRHFESTNDSSNQRRIIRINENTMSRDRNAADLNYQMMLLNLVIDD HHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHCC RKPYFENTQIKVRSNFETLMHDINEFTRKIHIEYDEKMKETDDAGCRSIMNEARKMARNT CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH METIEKSNHEMGEQVKHDIQALEDEVEHYFKK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITSLTILSSLAIIVTAVIAFAEYQAGKRRHSTTLSIEMLHKQKDDFIKWFYDYLHISQV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRVTIQLNMDRLEQRHFESTNDSSNQRRIIRINENTMSRDRNAADLNYQMMLLNLVIDD HHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHCC RKPYFENTQIKVRSNFETLMHDINEFTRKIHIEYDEKMKETDDAGCRSIMNEARKMARNT CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH METIEKSNHEMGEQVKHDIQALEDEVEHYFKK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA