Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yrjF
Identifier: 15673719
GI number: 15673719
Start: 1794821
End: 1795735
Strand: Reverse
Name: yrjF
Synonym: L178172
Alternate gene names: 15673719
Gene position: 1795735-1794821 (Counterclockwise)
Preceding gene: 15673720
Following gene: 15673718
Centisome position: 75.91
GC content: 32.13
Gene sequence:
>915_bases ATGAAAAATGTAAAAGTATTTTATAATGAAAAATCTGGTAATAATGATGAAGACAAAGTTTTGAAAACAATTAAGGACTT TTTTGCAAGACCAGAAAATTCAGCCTCTAAACTTGAATTTATCAATCCAGAAAGCCCAGAGGATGCAATCCGTCTTGCTA AAAAAGCCAGTCAAGACCAAACAGACCTTGTGGTTGCTTTAGCTGGCGATGGAACCATCAATAAAATTTGTGGAGGAGTA TTTGAAGGAGGAGCAAAACCGATTCTAGGCATTGTTCCTAATGGTACGGTTAATAATTTATCAAAATCACTTCATATTCC GCAAAAATTAGAAGAAGCACTTAATAATTTAAGTCAAGGCGAAATTCAAAAATTTGATATTGCCAAAGTCAATAATGATT ATATGACATCAAGTTTAACATTAGGGATTTTAGCAGATATTGCCCAAAATGTCAGCGGCTCTGAGAAGAAAAAATTTGGA CCTTTAGCTTATCTAAAAGATGCTTATAAAGTTATCCGCTATAATAAAACCTATCGAATTAAAGTAAAATATAATGGAAA AACCAAGTCATTAAGAACAAAACTATTATTGATTACAATGACAGATACAATTGGTGGAATGCAAGCTTTGGCCCCCAAAG CTAAAGTTGATGACGGACTTATCCGTGTTTATTCATTAAAAGAAATCAATTTATTTAATATCCTTTTTCATTTGAACAAA CTTCGTCGAGGAAAATTTGATGATTTTCTTGAAATGACTCATTTTGATACTGACCATTTAGAGATTCTCACACATTCAAA GAAAAAGAAAGATAATCCATATTCAAGAATTGATGGGGATAAAAGTGATCCGCTTCCATTAGATATCAAGGTTTATCGAA AAGCACTGACAACCCTTGTTCCTAAAAGTGAATAA
Upstream 100 bases:
>100_bases GTCAGTAAAATAAAGCAAGTCTTGTCAGAGATTTTTCATAATATGATAAAATTAGTATGTAAGCAATAAATTCCATTGCA CTAAAATAAGGAGGTATTTT
Downstream 100 bases:
>100_bases AAGGCTGTCAGTAAATAATAGAAATAAAAAATCAGACCTAAGACTGATGACAAAAAGCCCAAATTTTGGTAAAATAGTTT TAGATTTAAATTAAAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKNVKVFYNEKSGNNDEDKVLKTIKDFFARPENSASKLEFINPESPEDAIRLAKKASQDQTDLVVALAGDGTINKICGGV FEGGAKPILGIVPNGTVNNLSKSLHIPQKLEEALNNLSQGEIQKFDIAKVNNDYMTSSLTLGILADIAQNVSGSEKKKFG PLAYLKDAYKVIRYNKTYRIKVKYNGKTKSLRTKLLLITMTDTIGGMQALAPKAKVDDGLIRVYSLKEINLFNILFHLNK LRRGKFDDFLEMTHFDTDHLEILTHSKKKKDNPYSRIDGDKSDPLPLDIKVYRKALTTLVPKSE
Sequences:
>Translated_304_residues MKNVKVFYNEKSGNNDEDKVLKTIKDFFARPENSASKLEFINPESPEDAIRLAKKASQDQTDLVVALAGDGTINKICGGV FEGGAKPILGIVPNGTVNNLSKSLHIPQKLEEALNNLSQGEIQKFDIAKVNNDYMTSSLTLGILADIAQNVSGSEKKKFG PLAYLKDAYKVIRYNKTYRIKVKYNGKTKSLRTKLLLITMTDTIGGMQALAPKAKVDDGLIRVYSLKEINLFNILFHLNK LRRGKFDDFLEMTHFDTDHLEILTHSKKKKDNPYSRIDGDKSDPLPLDIKVYRKALTTLVPKSE >Mature_304_residues MKNVKVFYNEKSGNNDEDKVLKTIKDFFARPENSASKLEFINPESPEDAIRLAKKASQDQTDLVVALAGDGTINKICGGV FEGGAKPILGIVPNGTVNNLSKSLHIPQKLEEALNNLSQGEIQKFDIAKVNNDYMTSSLTLGILADIAQNVSGSEKKKFG PLAYLKDAYKVIRYNKTYRIKVKYNGKTKSLRTKLLLITMTDTIGGMQALAPKAKVDDGLIRVYSLKEINLFNILFHLNK LRRGKFDDFLEMTHFDTDHLEILTHSKKKKDNPYSRIDGDKSDPLPLDIKVYRKALTTLVPKSE
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=189, Percent_Identity=29.1005291005291, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 34037; Mature: 34037
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVKVFYNEKSGNNDEDKVLKTIKDFFARPENSASKLEFINPESPEDAIRLAKKASQDQ CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCC TDLVVALAGDGTINKICGGVFEGGAKPILGIVPNGTVNNLSKSLHIPQKLEEALNNLSQG CEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCC EIQKFDIAKVNNDYMTSSLTLGILADIAQNVSGSEKKKFGPLAYLKDAYKVIRYNKTYRI CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHEECCEEEE KVKYNGKTKSLRTKLLLITMTDTIGGMQALAPKAKVDDGLIRVYSLKEINLFNILFHLNK EEEECCCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHH LRRGKFDDFLEMTHFDTDHLEILTHSKKKKDNPYSRIDGDKSDPLPLDIKVYRKALTTLV HHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHC PKSE CCCC >Mature Secondary Structure MKNVKVFYNEKSGNNDEDKVLKTIKDFFARPENSASKLEFINPESPEDAIRLAKKASQDQ CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCC TDLVVALAGDGTINKICGGVFEGGAKPILGIVPNGTVNNLSKSLHIPQKLEEALNNLSQG CEEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCC EIQKFDIAKVNNDYMTSSLTLGILADIAQNVSGSEKKKFGPLAYLKDAYKVIRYNKTYRI CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHEECCEEEE KVKYNGKTKSLRTKLLLITMTDTIGGMQALAPKAKVDDGLIRVYSLKEINLFNILFHLNK EEEECCCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHH LRRGKFDDFLEMTHFDTDHLEILTHSKKKKDNPYSRIDGDKSDPLPLDIKVYRKALTTLV HHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHC PKSE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA