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The map label for this gene is yrjE

Identifier: 15673718

GI number: 15673718

Start: 1793995

End: 1794708

Strand: Reverse

Name: yrjE

Synonym: L177346

Alternate gene names: 15673718

Gene position: 1794708-1793995 (Counterclockwise)

Preceding gene: 15673719

Following gene: 15673713

Centisome position: 75.87

GC content: 36.27

Gene sequence:

>714_bases
ATGAAAAATATGAATGATAATAATGTTATCTTTGACCAAAGAAGCGATGGATTGAATGCATTTTTCAGTAAAATTTATGC
GTTGATGGGAGCAGGAGTATTAGTTTCTGCACTCGTTTCTTGGATAATGATTACATTTTTCTTAGATAACATGACAGCAA
TTCTCCAAAGTGGAAGTTTATTCTTCCTTGTACTCTGGATTATTCCTTTAGTGATGGTAGTATCACTTCAAGGGTTAGCA
ATGAAAAACTCAAAAATGGCACTACCGATTTTTATCGGTTATGCGGCATTTATGGGATTCTTGATTAGTTTTACACTTTT
GATGTATACCGCCACTGATATTACTTTAGCCTTTGTTACGGCAGCAGCAATGTTCTTTGGTTTATCTGTTTATGGACGAT
TTACTAAACGTAATTTATCGGCAATGGGTAAAGCATTTGGTGTTGCAGTCTGGGGCTTGATTATTGCAATGTTTCTTAAT
TTCTTCTTTGCAAGTACAGGACTTACAATCCTTATTAGCCTAGTAGGTGTTGTGATTTTCGCAGGGCTTATCGCTTGGGA
TAATCAAAAAATTACACAGGTTTATAATGCAAACAATGGACAAGTAAGTGATGGTTGGGCAATTTCAATGGCACTTTCAC
TCTATCTTGACTTCATCAACATGTTTCTCTTCCTACTCCGTCTTTTCGGTATCGCAGGTGGAAATCGCGATTAA

Upstream 100 bases:

>100_bases
AAATAATAGAAATAAAAAATCAGACCTAAGACTGATGACAAAAAGCCCAAATTTTGGTAAAATAGTTTTAGATTTAAATT
AAAAAGGGAGGCCAAATATA

Downstream 100 bases:

>100_bases
GCAAAAATTACTGACAACACATCTGTCAGTAAAATAATAATAAAAAACTCTGCTGTCAGCAGAGTTTTTTCCTTTCATAA
ATCTTTGACAATCACATAAT

Product: transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKNMNDNNVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMTAILQSGSLFFLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFVTAAAMFFGLSVYGRFTKRNLSAMGKAFGVAVWGLIIAMFLN
FFFASTGLTILISLVGVVIFAGLIAWDNQKITQVYNANNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD

Sequences:

>Translated_237_residues
MKNMNDNNVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMTAILQSGSLFFLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFVTAAAMFFGLSVYGRFTKRNLSAMGKAFGVAVWGLIIAMFLN
FFFASTGLTILISLVGVVIFAGLIAWDNQKITQVYNANNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
>Mature_237_residues
MKNMNDNNVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMTAILQSGSLFFLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFVTAAAMFFGLSVYGRFTKRNLSAMGKAFGVAVWGLIIAMFLN
FFFASTGLTILISLVGVVIFAGLIAWDNQKITQVYNANNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1787004, Length=226, Percent_Identity=33.6283185840708, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26070; Mature: 26070

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMNDNNVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMTAILQSGSL
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FFLVLWIIPLVMVVSLQGLAMKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFVT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAMFFGLSVYGRFTKRNLSAMGKAFGVAVWGLIIAMFLNFFFASTGLTILISLVGVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLIAWDNQKITQVYNANNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
HHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNMNDNNVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMTAILQSGSL
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FFLVLWIIPLVMVVSLQGLAMKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFVT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAMFFGLSVYGRFTKRNLSAMGKAFGVAVWGLIIAMFLNFFFASTGLTILISLVGVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLIAWDNQKITQVYNANNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
HHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]