Click here to switch to the map view.

The map label for this gene is yreD

Identifier: 15673671

GI number: 15673671

Start: 1745270

End: 1745806

Strand: Reverse

Name: yreD

Synonym: L128688

Alternate gene names: 15673671

Gene position: 1745806-1745270 (Counterclockwise)

Preceding gene: 30024051

Following gene: 15673664

Centisome position: 73.8

GC content: 34.64

Gene sequence:

>537_bases
ATGGTAAAAAATATATCGTTGGATTGGTTTTTGGGAATTTTATTGCCTTGCTTATGGATTGGTATTGTTTCTGGACTAAT
TTCTGGAATGGTAAAAATTGGTTGGGAAGCCATTCTTCCTCCTCGTACAAAAGAGCGAGATGAAACAAACCCTCCTCAAA
AACTTATGCAACAAATTGGCTTTCCCCAAAAAATTACTCATGCTTACTTTTTGTATTCTAAAGACCAAAAAGTGTATTGG
TTTGCCTTGATTCTTCATTTCAGTTTTTCAATTGTTTTTTCATTTATTTTTGTTGTCTTATCACAAATATGGAGTGGTAT
AAGCTTAGGCGAGGGGGCTCTTTATGGTATTATTATCTGGTTTTTATGGCATATTCTGTTAATGCCTATTAATAGAACGG
TACCACAACCTTGGAAGCAACCTTTTTCAGAACACTTTTCAGAATTTTTTGGACACATCGTCTGGGCTTGGTCAATAGCT
GCTGTGAGTTTTTATATGATTGCTACTCACTATTCAGATGTTCTTTCACTTTTCTAA

Upstream 100 bases:

>100_bases
ATCTTTATTTTTAATGAGCAAACAATTCAATACACTTTATAATAAATTTTTTATAAAATAAGAGTAGTTTTTATTTTATA
TATTATAAGGAGATTTTGAA

Downstream 100 bases:

>100_bases
AATAAAAAGAGCCATTCTTAAGAGGGCTTTTTTTATTTCAGATTTGATGAGAATTTATTCACTTTAAAGAGATTTTCTTC
AATAACAAATTCCCACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MVKNISLDWFLGILLPCLWIGIVSGLISGMVKIGWEAILPPRTKERDETNPPQKLMQQIGFPQKITHAYFLYSKDQKVYW
FALILHFSFSIVFSFIFVVLSQIWSGISLGEGALYGIIIWFLWHILLMPINRTVPQPWKQPFSEHFSEFFGHIVWAWSIA
AVSFYMIATHYSDVLSLF

Sequences:

>Translated_178_residues
MVKNISLDWFLGILLPCLWIGIVSGLISGMVKIGWEAILPPRTKERDETNPPQKLMQQIGFPQKITHAYFLYSKDQKVYW
FALILHFSFSIVFSFIFVVLSQIWSGISLGEGALYGIIIWFLWHILLMPINRTVPQPWKQPFSEHFSEFFGHIVWAWSIA
AVSFYMIATHYSDVLSLF
>Mature_178_residues
MVKNISLDWFLGILLPCLWIGIVSGLISGMVKIGWEAILPPRTKERDETNPPQKLMQQIGFPQKITHAYFLYSKDQKVYW
FALILHFSFSIVFSFIFVVLSQIWSGISLGEGALYGIIIWFLWHILLMPINRTVPQPWKQPFSEHFSEFFGHIVWAWSIA
AVSFYMIATHYSDVLSLF

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=161, Percent_Identity=29.8136645962733, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009898 [H]

Pfam domain/function: PF07274 DUF1440 [H]

EC number: NA

Molecular weight: Translated: 20689; Mature: 20689

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNISLDWFLGILLPCLWIGIVSGLISGMVKIGWEAILPPRTKERDETNPPQKLMQQIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHCC
FPQKITHAYFLYSKDQKVYWFALILHFSFSIVFSFIFVVLSQIWSGISLGEGALYGIIIW
CCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FLWHILLMPINRTVPQPWKQPFSEHFSEFFGHIVWAWSIAAVSFYMIATHYSDVLSLF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVKNISLDWFLGILLPCLWIGIVSGLISGMVKIGWEAILPPRTKERDETNPPQKLMQQIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHCC
FPQKITHAYFLYSKDQKVYWFALILHFSFSIVFSFIFVVLSQIWSGISLGEGALYGIIIW
CCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FLWHILLMPINRTVPQPWKQPFSEHFSEFFGHIVWAWSIAAVSFYMIATHYSDVLSLF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]