Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yqbI
Identifier: 15673559
GI number: 15673559
Start: 1618284
End: 1619063
Strand: Reverse
Name: yqbI
Synonym: L18033
Alternate gene names: NA
Gene position: 1619063-1618284 (Counterclockwise)
Preceding gene: 15673560
Following gene: 15673558
Centisome position: 68.44
GC content: 30.13
Gene sequence:
>780_bases ATGCCAAAGGAAAATTTTAATGGTGTAATTGCTGGTGGAATTACTTTTAAAGAGAAGGACTCAGAGAAAACAAATTCTAA TTCTAAGGGATTAAGTATTCAAAATAAATATGCTTACGTTGTTGCTTTACTGATGCAACAAAATAAAAATACTGTTGCGC CTGACTTGAAATTAAATAGTGTAGAGCCTAGTCAGGTTAATTATAGAAATGTAATTAATGCCAATTTACAAAATCCAATG GCTGGATATCTAAATCAAATGTATGTTCAAGCAGAGGTCAAAGGTTTAAGTAATTCTAAATTATCTTATAAGGCAAACAA AGAGATGCTGCAAATGGCACCAAATAGTAATTTTGATTATCCTGTTTCTATTGGTGATGGAAATAAGCTTGAAGCGGGTA AGTATCGTCTATCGATGACAGTATATGGGCAAAAAAATAATGACGGAAAGTTCACTTATGTTGATTCAAAAGGAAAAGAA CAAAAATTTGATTATCAATGGAAATTTACAAAAGACTTTACAATATTAGGTAAAACAGCAAGTAAATTAAATTCAAAAGA TGTAACTGTTAAAAAGACTCCGTGGTATGAAAATTGGCTTATCTGGTTAGGTTTATTATTAATTCTTTTAGCTCTTTTCT TCTTGTTCTTTATTTTATGGAAGAGACGTAAAAAAGAAGAAGAGGAGCAAGATTTAGAAAAAGAAAAATTAAAAGCTCAA CTTGAAGAAATGAGAGAGCAAATAAGTAAAGAAGATAATTCTGATGAGACAGACGTTTAG
Upstream 100 bases:
>100_bases AGATTCAACACTAAAGTATAATCTAGTAGACTATGCCTCAATTCCAAAAGAAGTATCACTACAACCAAACTCTTCACAGT AAGTAAAAGTGAGTGTTACT
Downstream 100 bases:
>100_bases GTTCTACTTAGATTTTTGAATCATGATTATTTACATTTATTAAAGTTAAGTAAAAGTAAAACAAATTGCAGGAGGTTTTT TATGGCCGAGAATCAGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Cell Wall Surface Anchor Family Protein; Secreted Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPKENFNGVIAGGITFKEKDSEKTNSNSKGLSIQNKYAYVVALLMQQNKNTVAPDLKLNSVEPSQVNYRNVINANLQNPM AGYLNQMYVQAEVKGLSNSKLSYKANKEMLQMAPNSNFDYPVSIGDGNKLEAGKYRLSMTVYGQKNNDGKFTYVDSKGKE QKFDYQWKFTKDFTILGKTASKLNSKDVTVKKTPWYENWLIWLGLLLILLALFFLFFILWKRRKKEEEEQDLEKEKLKAQ LEEMREQISKEDNSDETDV
Sequences:
>Translated_259_residues MPKENFNGVIAGGITFKEKDSEKTNSNSKGLSIQNKYAYVVALLMQQNKNTVAPDLKLNSVEPSQVNYRNVINANLQNPM AGYLNQMYVQAEVKGLSNSKLSYKANKEMLQMAPNSNFDYPVSIGDGNKLEAGKYRLSMTVYGQKNNDGKFTYVDSKGKE QKFDYQWKFTKDFTILGKTASKLNSKDVTVKKTPWYENWLIWLGLLLILLALFFLFFILWKRRKKEEEEQDLEKEKLKAQ LEEMREQISKEDNSDETDV >Mature_258_residues PKENFNGVIAGGITFKEKDSEKTNSNSKGLSIQNKYAYVVALLMQQNKNTVAPDLKLNSVEPSQVNYRNVINANLQNPMA GYLNQMYVQAEVKGLSNSKLSYKANKEMLQMAPNSNFDYPVSIGDGNKLEAGKYRLSMTVYGQKNNDGKFTYVDSKGKEQ KFDYQWKFTKDFTILGKTASKLNSKDVTVKKTPWYENWLIWLGLLLILLALFFLFFILWKRRKKEEEEQDLEKEKLKAQL EEMREQISKEDNSDETDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29866; Mature: 29735
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKENFNGVIAGGITFKEKDSEKTNSNSKGLSIQNKYAYVVALLMQQNKNTVAPDLKLNS CCCCCCCEEEECCEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCEECC VEPSQVNYRNVINANLQNPMAGYLNQMYVQAEVKGLSNSKLSYKANKEMLQMAPNSNFDY CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEHHCHHHHHHCCCCCCCE PVSIGDGNKLEAGKYRLSMTVYGQKNNDGKFTYVDSKGKEQKFDYQWKFTKDFTILGKTA EEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCEEEEECHH SKLNSKDVTVKKTPWYENWLIWLGLLLILLALFFLFFILWKRRKKEEEEQDLEKEKLKAQ HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LEEMREQISKEDNSDETDV HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PKENFNGVIAGGITFKEKDSEKTNSNSKGLSIQNKYAYVVALLMQQNKNTVAPDLKLNS CCCCCCEEEECCEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCEECC VEPSQVNYRNVINANLQNPMAGYLNQMYVQAEVKGLSNSKLSYKANKEMLQMAPNSNFDY CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEHHCHHHHHHCCCCCCCE PVSIGDGNKLEAGKYRLSMTVYGQKNNDGKFTYVDSKGKEQKFDYQWKFTKDFTILGKTA EEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCEEEEECHH SKLNSKDVTVKKTPWYENWLIWLGLLLILLALFFLFFILWKRRKKEEEEQDLEKEKLKAQ HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LEEMREQISKEDNSDETDV HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA