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The map label for this gene is ypjF

Identifier: 15673536

GI number: 15673536

Start: 1594476

End: 1595450

Strand: Reverse

Name: ypjF

Synonym: L194226

Alternate gene names: 15673536

Gene position: 1595450-1594476 (Counterclockwise)

Preceding gene: 15673537

Following gene: 15673534

Centisome position: 67.44

GC content: 34.77

Gene sequence:

>975_bases
ATGTTAAAAATCGGAATTATGGGTGCCGCTAAAATTGTTCCAAGATTTGTAGCAGGTGTAAAAGAGAGTGGTCAAGCTGA
AGTTACTGGGATTGCCGCCAGAAATAAGGAAAAAGCACAAAAAGCCGCTTTGGAATTAGAAATTCCACAAGTTTATGATG
ATTATGCAAGCTTAGTAAATGCAGCAGAAATTGATTTAATCTATATTCCACTCATCAATAAACAACATTATCCTCAAGCA
AAAATGGCTTTAGAAGCAGGTAAAAATGTACTTCTAGAAAAACCATTTACCTTGACTCTTGAAGAAAGTCAGGAATTATT
CAAGATAGCAAATGAAAAAAATCTTTTTTTGATGGAAGCTCAAAAATCTGTTTTCCTACCTGTGATGGCCCAAATCAAAA
AATGGCTTGATGCCAATGAAATTGGTAAAATATCTCGTCTTGCAATAAATGATTTCAGACCCCATACCAACCGGGAGAGC
TGGGCCTTAGACATAAAAGAAGGCGGTGGCGCTTTTATCATGCATGCCAGCTATCCACTCTCTGTCTTACAATTCTTATT
TGGAACAGGTTTTGATGCAGCAAAAGGAATTTATTGGTCTTCTGAAGAAAATAAAGCAGATTTAGATTACGAAATTCTCT
TAAAAAAAGCAGAAATTATGATTAATATTTCACTTAGCACGCGCTTAGATAAACCAAATACATTTATCATTTACGGTGAA
AAAGGAGAAATTTCAGTTCCAAATTATTGGAAATCAAACCAAGCCAGTCTTATTAAAAATGATGGAACGGTTGAAGAATT
TTCTCATCCAATGCCAAGTGAATTCAGCTATGAGATTGATGAAATTGCTGAACTAATCAATAAGGGCAAGAAAAAAAGTG
AAAAACTTTCCCCAGAAATGACAATGACGACAGTCAAAATTGTGGAAGACCTATACCAAGAATGGTTTGGTAAAGAGTGG
CCAAATATAAAATAA

Upstream 100 bases:

>100_bases
GTAGAAAATTTGGCCAGAGTCCGTGTTACCACTGTAGGAGTTGAAACCGTAGATACCGTGATTATTGGTATTTAAACCCA
GAGACGAAAGAGGAAGTCAA

Downstream 100 bases:

>100_bases
AAACACTAGTTATCTAGTGTTTTTTCTTAAAAATTTAAATTTCCCTTTAAAACGTTGTAAGGCTAAATAACGTTCACGTG
CTTTGTGCATCGCTTGGTAA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLKIGIMGAAKIVPRFVAGVKESGQAEVTGIAARNKEKAQKAALELEIPQVYDDYASLVNAAEIDLIYIPLINKQHYPQA
KMALEAGKNVLLEKPFTLTLEESQELFKIANEKNLFLMEAQKSVFLPVMAQIKKWLDANEIGKISRLAINDFRPHTNRES
WALDIKEGGGAFIMHASYPLSVLQFLFGTGFDAAKGIYWSSEENKADLDYEILLKKAEIMINISLSTRLDKPNTFIIYGE
KGEISVPNYWKSNQASLIKNDGTVEEFSHPMPSEFSYEIDEIAELINKGKKKSEKLSPEMTMTTVKIVEDLYQEWFGKEW
PNIK

Sequences:

>Translated_324_residues
MLKIGIMGAAKIVPRFVAGVKESGQAEVTGIAARNKEKAQKAALELEIPQVYDDYASLVNAAEIDLIYIPLINKQHYPQA
KMALEAGKNVLLEKPFTLTLEESQELFKIANEKNLFLMEAQKSVFLPVMAQIKKWLDANEIGKISRLAINDFRPHTNRES
WALDIKEGGGAFIMHASYPLSVLQFLFGTGFDAAKGIYWSSEENKADLDYEILLKKAEIMINISLSTRLDKPNTFIIYGE
KGEISVPNYWKSNQASLIKNDGTVEEFSHPMPSEFSYEIDEIAELINKGKKKSEKLSPEMTMTTVKIVEDLYQEWFGKEW
PNIK
>Mature_324_residues
MLKIGIMGAAKIVPRFVAGVKESGQAEVTGIAARNKEKAQKAALELEIPQVYDDYASLVNAAEIDLIYIPLINKQHYPQA
KMALEAGKNVLLEKPFTLTLEESQELFKIANEKNLFLMEAQKSVFLPVMAQIKKWLDANEIGKISRLAINDFRPHTNRES
WALDIKEGGGAFIMHASYPLSVLQFLFGTGFDAAKGIYWSSEENKADLDYEILLKKAEIMINISLSTRLDKPNTFIIYGE
KGEISVPNYWKSNQASLIKNDGTVEEFSHPMPSEFSYEIDEIAELINKGKKKSEKLSPEMTMTTVKIVEDLYQEWFGKEW
PNIK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=325, Percent_Identity=25.8461538461538, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1789848, Length=300, Percent_Identity=27.3333333333333, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI145693182, Length=164, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081947, Length=189, Percent_Identity=28.042328042328, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581115, Length=330, Percent_Identity=27.5757575757576, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24581117, Length=283, Percent_Identity=28.6219081272085, Blast_Score=104, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36604; Mature: 36604

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIGIMGAAKIVPRFVAGVKESGQAEVTGIAARNKEKAQKAALELEIPQVYDDYASLVN
CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHEEEECHHHHHHHHHHHC
AAEIDLIYIPLINKQHYPQAKMALEAGKNVLLEKPFTLTLEESQELFKIANEKNLFLMEA
CCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHCCCCCEEEEEC
QKSVFLPVMAQIKKWLDANEIGKISRLAINDFRPHTNRESWALDIKEGGGAFIMHASYPL
CCHHHHHHHHHHHHHCCHHHCCCHHHEEECCCCCCCCCCCEEEEEECCCCEEEEECCCHH
SVLQFLFGTGFDAAKGIYWSSEENKADLDYEILLKKAEIMINISLSTRLDKPNTFIIYGE
HHHHHHHCCCCCHHCCEEECCCCCCCCCCHHHHEEEEEEEEEEEEEECCCCCCEEEEECC
KGEISVPNYWKSNQASLIKNDGTVEEFSHPMPSEFSYEIDEIAELINKGKKKSEKLSPEM
CCCEECCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCH
TMTTVKIVEDLYQEWFGKEWPNIK
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKIGIMGAAKIVPRFVAGVKESGQAEVTGIAARNKEKAQKAALELEIPQVYDDYASLVN
CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHEEEECHHHHHHHHHHHC
AAEIDLIYIPLINKQHYPQAKMALEAGKNVLLEKPFTLTLEESQELFKIANEKNLFLMEA
CCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHCCCCCEEEEEC
QKSVFLPVMAQIKKWLDANEIGKISRLAINDFRPHTNRESWALDIKEGGGAFIMHASYPL
CCHHHHHHHHHHHHHCCHHHCCCHHHEEECCCCCCCCCCCEEEEEECCCCEEEEECCCHH
SVLQFLFGTGFDAAKGIYWSSEENKADLDYEILLKKAEIMINISLSTRLDKPNTFIIYGE
HHHHHHHCCCCCHHCCEEECCCCCCCCCCHHHHEEEEEEEEEEEEEECCCCCCEEEEECC
KGEISVPNYWKSNQASLIKNDGTVEEFSHPMPSEFSYEIDEIAELINKGKKKSEKLSPEM
CCCEECCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCH
TMTTVKIVEDLYQEWFGKEWPNIK
HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]