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The map label for this gene is ypcB

Identifier: 15673472

GI number: 15673472

Start: 1521323

End: 1521931

Strand: Reverse

Name: ypcB

Synonym: L121071

Alternate gene names: NA

Gene position: 1521931-1521323 (Counterclockwise)

Preceding gene: 15673473

Following gene: 15673471

Centisome position: 64.34

GC content: 31.69

Gene sequence:

>609_bases
ATGATTGGAAAAGCACTAGAAGAATTCTTTATTCGAATTTGGGTCGTTGTTAAATTGACCTTGATATTTTGGCTCTTAGC
GCTCACAGGGCTGTTTGTTTTTGGACTTGGTCCTGCCTTTAAAGTGGTAACAGAGTTGTATTTGGAACATGGTTTTGACT
ATAAGTCAATCTCAGTGAAACAGGCTTATCAAATTTTCAAGCGAGACTTTTTAAGAGCAAATATCATTTTTTGGCTCTAT
ACCTCTTTGAGTCTTTTGCTCGCTTATAATTTATATCTTTCAGTACAACTCCAAGGTTTACTTTTCTTGGTGATTGATTT
CATTCTATTCTTTGGTTTAACTTATCTTATGACCGCTTTTGAATATACAATGATTTTTGATAGTCAATTTGAAATTAGTT
TTGGAAACTTATTAAAAATGAGCTTTATTTCAAATTTTATTAGTTTTAAAACCTATCTAAAACTTTTATTTGGGATTGTC
CTTATCTTTGTTTTGACTTGGCAATTTAAAGGCATGATTCTCTTTGGTTTGATTGGCCTTTTACAAGTTTATTCTTTAAG
TGTGACAAAAACTTGGCGTTTGAAAGTCGAAGAACAGTTAGCAGAGTAA

Upstream 100 bases:

>100_bases
AGGTTGCCATAAAAGCAAAGAAAAGGCTATCATGAAAACCCTAACATTTCATTGGAAAAGTGTTATAATGAAGTAATAAA
AGTTAGAAAGTTATAGAAAA

Downstream 100 bases:

>100_bases
AAAAGAAGAGTTACTGAGAGGGGTGGAAAATGGAATTAAAATTCCAAGAAAATTTTTTGTGGGGAGCAGCAACGAGTGGC
CCACAAACTGAAGGACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIGKALEEFFIRIWVVVKLTLIFWLLALTGLFVFGLGPAFKVVTELYLEHGFDYKSISVKQAYQIFKRDFLRANIIFWLY
TSLSLLLAYNLYLSVQLQGLLFLVIDFILFFGLTYLMTAFEYTMIFDSQFEISFGNLLKMSFISNFISFKTYLKLLFGIV
LIFVLTWQFKGMILFGLIGLLQVYSLSVTKTWRLKVEEQLAE

Sequences:

>Translated_202_residues
MIGKALEEFFIRIWVVVKLTLIFWLLALTGLFVFGLGPAFKVVTELYLEHGFDYKSISVKQAYQIFKRDFLRANIIFWLY
TSLSLLLAYNLYLSVQLQGLLFLVIDFILFFGLTYLMTAFEYTMIFDSQFEISFGNLLKMSFISNFISFKTYLKLLFGIV
LIFVLTWQFKGMILFGLIGLLQVYSLSVTKTWRLKVEEQLAE
>Mature_202_residues
MIGKALEEFFIRIWVVVKLTLIFWLLALTGLFVFGLGPAFKVVTELYLEHGFDYKSISVKQAYQIFKRDFLRANIIFWLY
TSLSLLLAYNLYLSVQLQGLLFLVIDFILFFGLTYLMTAFEYTMIFDSQFEISFGNLLKMSFISNFISFKTYLKLLFGIV
LIFVLTWQFKGMILFGLIGLLQVYSLSVTKTWRLKVEEQLAE

Specific function: Unknown

COG id: COG5578

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23666; Mature: 23666

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKALEEFFIRIWVVVKLTLIFWLLALTGLFVFGLGPAFKVVTELYLEHGFDYKSISVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH
QAYQIFKRDFLRANIIFWLYTSLSLLLAYNLYLSVQLQGLLFLVIDFILFFGLTYLMTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYTMIFDSQFEISFGNLLKMSFISNFISFKTYLKLLFGIVLIFVLTWQFKGMILFGLIGL
HHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVYSLSVTKTWRLKVEEQLAE
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGKALEEFFIRIWVVVKLTLIFWLLALTGLFVFGLGPAFKVVTELYLEHGFDYKSISVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH
QAYQIFKRDFLRANIIFWLYTSLSLLLAYNLYLSVQLQGLLFLVIDFILFFGLTYLMTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYTMIFDSQFEISFGNLLKMSFISNFISFKTYLKLLFGIVLIFVLTWQFKGMILFGLIGL
HHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVYSLSVTKTWRLKVEEQLAE
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA