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The map label for this gene is yofM

Identifier: 15673416

GI number: 15673416

Start: 1457654

End: 1457989

Strand: Reverse

Name: yofM

Synonym: L57401

Alternate gene names: NA

Gene position: 1457989-1457654 (Counterclockwise)

Preceding gene: 15673419

Following gene: 15673411

Centisome position: 61.63

GC content: 29.17

Gene sequence:

>336_bases
ATGGAAATCGAAAAAACGAATCGAATGAATACTCTTTTTGAGTTTTATGCGACACTCTTGACTGATAAACAAATGAATTA
CATTGAACTTTATTATGCCGATGATTATAGTTTGGCAGAGATTGCTGAAGAATTTAATATCAGTCGTCAAGCTGTTTATG
ACAATATCAAGAGAACAGAAAAAGTACTTGAAAGCTACGAAGAAAAATTACACCTTTTTAGTAATTATGTGGTTCGTAAT
CAATTGTTAGAAGAGCTAATGAAAAAATATTCAACTGACCAATATTTAATCACTAAACTACAAGAAATTCAACAAATTGA
TGAAGAAGAGTTTTAA

Upstream 100 bases:

>100_bases
TGATAAAGATAAAAAAATTACATTTTATTATTTTAAATCATCAATTAGAAAATAATGAATAAACATAAAAAATGATATAA
ATTTTGTTATAATAGAGCTT

Downstream 100 bases:

>100_bases
AGAATTTACTGACAGAAATTTTTTTATTACTGACAGCTTTGAATCAAATGATAAAGGAATCTGTCAGCTCACCTTTCTCA
TATAAAATACATACTTTAAT

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYSTDQYLITKLQEIQQIDEEEF

Sequences:

>Translated_111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYSTDQYLITKLQEIQQIDEEEF
>Mature_111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYSTDQYLITKLQEIQQIDEEEF

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 13550; Mature: 13550

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHH
KVLESYEEKLHLFSNYVVRNQLLEELMKKYSTDQYLITKLQEIQQIDEEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHH
KVLESYEEKLHLFSNYVVRNQLLEELMKKYSTDQYLITKLQEIQQIDEEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA