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The map label for this gene is gadR

Identifier: 15673274

GI number: 15673274

Start: 1326911

End: 1327741

Strand: Reverse

Name: gadR

Synonym: L126656

Alternate gene names: 15673274

Gene position: 1327741-1326911 (Counterclockwise)

Preceding gene: 15673275

Following gene: 15673273

Centisome position: 56.13

GC content: 28.64

Gene sequence:

>831_bases
ATGTATAAAAAATATGGAGATTGTTTTAAAAAGTTACGAAACCAAAAGAATTTAGGATTATCATACTTTAGTAAATTAGG
AATAGACCGTTCAAATATATCTAGATTTGAACATGGAAAGTGTATGATGAGTTTTGAGTGCATAGATTTGATGTTAGAAG
AAATGCAAGTGCCATTAGCTGAGTACGAATTGATAGTAAATAATTATATGCCGAATTTCCAAGAATTTTTTATATTAGAA
TTGGAAAAAGCTGAATTTAGTCAAAATCGAGATAAAATAAAAGAGTTATATTCTGAGGTTAAAGAAACAGGGAATCATTT
ACTGACGATTACCGTTAAAACGAAGCTTGGGACTATTAGTCAGATAGAAGTTAAGGAAATTGAAACTTATCTTTGTAATA
TTGAAGAGTGGGGATATTTTGAACTAACTTTATTCTATTTTGTATCTGATTATCTCAATGTCAATCAATTAGAATTGTTG
CTTTTTAACTTTGACAAAAGATGTGAAAATTACTGTAGAGTCTTAAAATATAGAAGGAGACTATTGCAAATAGCCTATAA
AAGCGTTGCGATATATGCGGCTAATGGAGAAAGAGCAAAAGCCGAAAATATTTTAGAAATAACTAAAAAATATCGAACTG
TAGGTGTCGATTTATATTCTGAAGTATTAAGACATCTTGCCAGAGGTATCATTATTTTTAATTTTGAAAATGCAGAAGTG
GGAGAAGAAAAAATAAATTATGCGCTTGAAACTTTGGAAGAATTTGGAGGAATGAAGATAAAAGAATTCTATCAGAAAAA
AATGGAAAAGTATTTGAAAAAGTCAATTTAG

Upstream 100 bases:

>100_bases
AAATAACAGCTACATTGACATACTGATTAAAGAGTATAGCCAATGAACTGTTATAAATCTTGAAAAAACAATAAAAATAA
TAGTTTGGGGGATGTTGAGA

Downstream 100 bases:

>100_bases
TCTCTTTTAAACTGTTGCTTTAAAGCAACAGTTTAAAAGAGATTTTTTTTATTCTGGAGCATATACTAGAAAATGAAGAT
GAGTTGTATGAGGCTATATA

Product: positive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MYKKYGDCFKKLRNQKNLGLSYFSKLGIDRSNISRFEHGKCMMSFECIDLMLEEMQVPLAEYELIVNNYMPNFQEFFILE
LEKAEFSQNRDKIKELYSEVKETGNHLLTITVKTKLGTISQIEVKEIETYLCNIEEWGYFELTLFYFVSDYLNVNQLELL
LFNFDKRCENYCRVLKYRRRLLQIAYKSVAIYAANGERAKAENILEITKKYRTVGVDLYSEVLRHLARGIIIFNFENAEV
GEEKINYALETLEEFGGMKIKEFYQKKMEKYLKKSI

Sequences:

>Translated_276_residues
MYKKYGDCFKKLRNQKNLGLSYFSKLGIDRSNISRFEHGKCMMSFECIDLMLEEMQVPLAEYELIVNNYMPNFQEFFILE
LEKAEFSQNRDKIKELYSEVKETGNHLLTITVKTKLGTISQIEVKEIETYLCNIEEWGYFELTLFYFVSDYLNVNQLELL
LFNFDKRCENYCRVLKYRRRLLQIAYKSVAIYAANGERAKAENILEITKKYRTVGVDLYSEVLRHLARGIIIFNFENAEV
GEEKINYALETLEEFGGMKIKEFYQKKMEKYLKKSI
>Mature_276_residues
MYKKYGDCFKKLRNQKNLGLSYFSKLGIDRSNISRFEHGKCMMSFECIDLMLEEMQVPLAEYELIVNNYMPNFQEFFILE
LEKAEFSQNRDKIKELYSEVKETGNHLLTITVKTKLGTISQIEVKEIETYLCNIEEWGYFELTLFYFVSDYLNVNQLELL
LFNFDKRCENYCRVLKYRRRLLQIAYKSVAIYAANGERAKAENILEITKKYRTVGVDLYSEVLRHLARGIIIFNFENAEV
GEEKINYALETLEEFGGMKIKEFYQKKMEKYLKKSI

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 32841; Mature: 32841

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKYGDCFKKLRNQKNLGLSYFSKLGIDRSNISRFEHGKCMMSFECIDLMLEEMQVPLA
CCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
EYELIVNNYMPNFQEFFILELEKAEFSQNRDKIKELYSEVKETGNHLLTITVKTKLGTIS
HHHHHHHHCCCCHHHHEEEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCH
QIEVKEIETYLCNIEEWGYFELTLFYFVSDYLNVNQLELLLFNFDKRCENYCRVLKYRRR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQIAYKSVAIYAANGERAKAENILEITKKYRTVGVDLYSEVLRHLARGIIIFNFENAEV
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
GEEKINYALETLEEFGGMKIKEFYQKKMEKYLKKSI
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKKYGDCFKKLRNQKNLGLSYFSKLGIDRSNISRFEHGKCMMSFECIDLMLEEMQVPLA
CCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
EYELIVNNYMPNFQEFFILELEKAEFSQNRDKIKELYSEVKETGNHLLTITVKTKLGTIS
HHHHHHHHCCCCHHHHEEEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCH
QIEVKEIETYLCNIEEWGYFELTLFYFVSDYLNVNQLELLLFNFDKRCENYCRVLKYRRR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQIAYKSVAIYAANGERAKAENILEITKKYRTVGVDLYSEVLRHLARGIIIFNFENAEV
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
GEEKINYALETLEEFGGMKIKEFYQKKMEKYLKKSI
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]