Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yljB
Identifier: 15673157
GI number: 15673157
Start: 1191722
End: 1192318
Strand: Reverse
Name: yljB
Synonym: L191486
Alternate gene names: 15673157
Gene position: 1192318-1191722 (Counterclockwise)
Preceding gene: 15673167
Following gene: 15673131
Centisome position: 50.4
GC content: 36.35
Gene sequence:
>597_bases ATGCCTTTGATGGCTAAAGCAGCTGCACAAGCGGGAGCCGTTGGAATTAGGGCAAATTCTGTAAGAGATATTAAAGAAAT TCAAAAAATAGTTGATTTACCAATAATTGGTATTATTAAAAGAGATTATCCACCACAAAAACCTTTTATTACTGCTACCA TGAAAGAAATTGATGAGTTAGTAGCCACTTCTTGTGAAGTCATCGCCTTGGATTGTACCTCTAGAGAACGTTATGATGGC CTAACTATTAATGAATTTATCAAATCAATCAAAGAAAAATATCCAAACCAACTTTTGATGGCAGATTGTTCAACCTTTGA AGAATGTAAAAATGCATATGAAGCTGGGGTAGATTTTGTTGGTACAACGCTTAGTGGTTATACAGATGAAAGTCCAAAAC AAGATGAACCTGATTTTACCTTACTTGAAAAACTAGTTGAGGAGAAGATTCCAGTCATTGCAGAGGGAAGAATTCATAGT CCAGAACAAGCCAAACGCGTTTATGATATCGGTGTTGATGCCATGGTTATCGGGGGAGCAATAACCAGACCTTTTGAGAT TGCCACACGATTTATAAAAGCAATTGGTGAAAAATAG
Upstream 100 bases:
>100_bases GGTGAAAAAAGAAGTATTTTTAGACAAAGTAAAAAATGGTATTATTGTATCCTGTCAGGCTTTACCTGGTGAAGCTTTAT ATTCTGAAAAAGGTGGTATA
Downstream 100 bases:
>100_bases TAGCCCATTCATCAGAATAAAAAAAGATACCTCCAAAAAGGATGGTGTCTTTTTTTTATGCTTATCTCTCGTTTACATTT TCTTTATTAACCTGAGATCT
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPLMAKAAAQAGAVGIRANSVRDIKEIQKIVDLPIIGIIKRDYPPQKPFITATMKEIDELVATSCEVIALDCTSRERYDG LTINEFIKSIKEKYPNQLLMADCSTFEECKNAYEAGVDFVGTTLSGYTDESPKQDEPDFTLLEKLVEEKIPVIAEGRIHS PEQAKRVYDIGVDAMVIGGAITRPFEIATRFIKAIGEK
Sequences:
>Translated_198_residues MPLMAKAAAQAGAVGIRANSVRDIKEIQKIVDLPIIGIIKRDYPPQKPFITATMKEIDELVATSCEVIALDCTSRERYDG LTINEFIKSIKEKYPNQLLMADCSTFEECKNAYEAGVDFVGTTLSGYTDESPKQDEPDFTLLEKLVEEKIPVIAEGRIHS PEQAKRVYDIGVDAMVIGGAITRPFEIATRFIKAIGEK >Mature_197_residues PLMAKAAAQAGAVGIRANSVRDIKEIQKIVDLPIIGIIKRDYPPQKPFITATMKEIDELVATSCEVIALDCTSRERYDGL TINEFIKSIKEKYPNQLLMADCSTFEECKNAYEAGVDFVGTTLSGYTDESPKQDEPDFTLLEKLVEEKIPVIAEGRIHSP EQAKRVYDIGVDAMVIGGAITRPFEIATRFIKAIGEK
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential)
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family
Homologues:
Organism=Escherichia coli, GI1789617, Length=185, Percent_Identity=36.7567567567568, Blast_Score=107, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NANE_LACLA (Q9CGC2)
Other databases:
- EMBL: AE005176 - PIR: G86771 - RefSeq: NP_267331.1 - ProteinModelPortal: Q9CGC2 - SMR: Q9CGC2 - GeneID: 1114818 - GenomeReviews: AE005176_GR - KEGG: lla:L191486 - NMPDR: fig|272623.1.peg.1209 - HOGENOM: HBG296941 - OMA: ITRPMEI - ProtClustDB: PRK01130 - BioCyc: LLAC272623:L191486-MONOMER - BRENDA: 5.1.3.9 - HAMAP: MF_01235 - InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF04131 NanE; SSF51366 RibP_bind_barrel
EC number: =5.1.3.9
Molecular weight: Translated: 21915; Mature: 21783
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLMAKAAAQAGAVGIRANSVRDIKEIQKIVDLPIIGIIKRDYPPQKPFITATMKEIDEL CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH VATSCEVIALDCTSRERYDGLTINEFIKSIKEKYPNQLLMADCSTFEECKNAYEAGVDFV HHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHH GTTLSGYTDESPKQDEPDFTLLEKLVEEKIPVIAEGRIHSPEQAKRVYDIGVDAMVIGGA HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCHHEECCC ITRPFEIATRFIKAIGEK CCCHHHHHHHHHHHHCCC >Mature Secondary Structure PLMAKAAAQAGAVGIRANSVRDIKEIQKIVDLPIIGIIKRDYPPQKPFITATMKEIDEL CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH VATSCEVIALDCTSRERYDGLTINEFIKSIKEKYPNQLLMADCSTFEECKNAYEAGVDFV HHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHH GTTLSGYTDESPKQDEPDFTLLEKLVEEKIPVIAEGRIHSPEQAKRVYDIGVDAMVIGGA HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCHHEECCC ITRPFEIATRFIKAIGEK CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471