Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ykiG
Identifier: 15673058
GI number: 15673058
Start: 1087351
End: 1088712
Strand: Reverse
Name: ykiG
Synonym: L87113
Alternate gene names: 15673058
Gene position: 1088712-1087351 (Counterclockwise)
Preceding gene: 15673071
Following gene: 15673057
Centisome position: 46.02
GC content: 34.8
Gene sequence:
>1362_bases TTGGAAAAAGTCTTTCGTGACCCAGTTCATGACTATATCACGGTGAATCATCCTGTAATATCAGAATTGATTGACACTGC TGAATTCCAACGTTTAAGACGAATTAAACAACTTGGAACATCAAGCTTTACCTTCCATGGAGCTGAACATACCCGTTTTT CTCATTGTTTGGGTGTTTACCACATTGCCAAAAGGATTACTGATTATTTTAGTCGGAATTTCCCTTTGGAATGGAATCCT GATGAGAATCTTTTAACTCAGTGTGCAGCCTTATTACACGATGTTGGACATGGTGCTTATTCACACACTTTTGAAGGTTT ATTTAATACAGACCACGAGGCGGTCACTCAAGAAATAATTACTTCTCCTGATACAGAAATTAATGAAATTTTACGCAAAG TCTCTCCTGATTTTCCTGAAAAGGTAGCTTCTGTTATTTCTCATGAATATTCTAATCCTCAAGTTGTTCAATTGATTTCA AGTCAAATTGATGCTGACCGCATGGATTATCTCCTTAGAGATGCTTATTTTACTGGTGCTGTCTATGGACAATTTGATTT AACTTGGATTTTAAGAGTGATTGTTCCTACGGAAAATGGAATTGCTTTTAAGTACTCAGGAATGCATGCAGTTGAAGACT ATATTGTCAGTCGATACCAAATGTATATGCAGGTTTATTTTCATGCTTCTTCACGCTCAATGGAAGTTTTACTGCAAAAG TTACTCGCACGTGCTAAGTTTTTATATGCCAGTCAGCCAGACTATTTTGCGATATCAAGTCCTTGTCTCGTTCCCTTTTT CGAGCAAAATCATAATTTACAAGATTATTTAAGACTTGATGATGGCGTTATGAACACTTATTTTCAAGTTTGGATGAGTC ATGATGATGAAATTCTCGCTGATTTAGCTTCTGCTTATGTCAATCGTCATTTACTCAAATCAATTACTTTTGACCCCAAG ACTGTAGAATTAGAAGATTTAGAAATTTTATCTTCTTTGGTTGAAGAAGCAGGCTTTAATCCTGACTATTACACTGGTAT TCATAGTAATTATGATTTACCTTATGATTTCTATCGACCAAGTTCTGAAAAACCGCGGACTGAAATTAATATTTTACAAA AAAATGGTTCGCTTACAGAGCTGTCAGTACTTTCTCCACTTATTAAAAGTTTGACAGGTACAATTCATGGAAATAGCCGA TTCTATTTTCCAAAAATTATGCTAGAAAATCCTGAATTTACAAAGTATATTGTTAATGACAGCTTGGTGATTAATCAAAA TTTTACTGACAGAAATTCTACTGCCTCTGAAAATACTGACGACTCTGTCAGTAAACAATTATCACTTGATGACAACCTAT AA
Upstream 100 bases:
>100_bases GCATTTTAGGAGAAAATAGGGTATAATTAGGATAAAATAAGGGAAAATCTGATTTATTTTTAATAGAGAATAGACCTTAA ATTTTAGAGGGGGTTTTATT
Downstream 100 bases:
>100_bases TTGCTAAATATTTAATAAATTGAAAGAAATAGAAAGAGAAATTCTTATGATTAAACTTGTTGCTATTGACCTTGACGGAA CTTTACTTGACCCTAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MEKVFRDPVHDYITVNHPVISELIDTAEFQRLRRIKQLGTSSFTFHGAEHTRFSHCLGVYHIAKRITDYFSRNFPLEWNP DENLLTQCAALLHDVGHGAYSHTFEGLFNTDHEAVTQEIITSPDTEINEILRKVSPDFPEKVASVISHEYSNPQVVQLIS SQIDADRMDYLLRDAYFTGAVYGQFDLTWILRVIVPTENGIAFKYSGMHAVEDYIVSRYQMYMQVYFHASSRSMEVLLQK LLARAKFLYASQPDYFAISSPCLVPFFEQNHNLQDYLRLDDGVMNTYFQVWMSHDDEILADLASAYVNRHLLKSITFDPK TVELEDLEILSSLVEEAGFNPDYYTGIHSNYDLPYDFYRPSSEKPRTEINILQKNGSLTELSVLSPLIKSLTGTIHGNSR FYFPKIMLENPEFTKYIVNDSLVINQNFTDRNSTASENTDDSVSKQLSLDDNL
Sequences:
>Translated_453_residues MEKVFRDPVHDYITVNHPVISELIDTAEFQRLRRIKQLGTSSFTFHGAEHTRFSHCLGVYHIAKRITDYFSRNFPLEWNP DENLLTQCAALLHDVGHGAYSHTFEGLFNTDHEAVTQEIITSPDTEINEILRKVSPDFPEKVASVISHEYSNPQVVQLIS SQIDADRMDYLLRDAYFTGAVYGQFDLTWILRVIVPTENGIAFKYSGMHAVEDYIVSRYQMYMQVYFHASSRSMEVLLQK LLARAKFLYASQPDYFAISSPCLVPFFEQNHNLQDYLRLDDGVMNTYFQVWMSHDDEILADLASAYVNRHLLKSITFDPK TVELEDLEILSSLVEEAGFNPDYYTGIHSNYDLPYDFYRPSSEKPRTEINILQKNGSLTELSVLSPLIKSLTGTIHGNSR FYFPKIMLENPEFTKYIVNDSLVINQNFTDRNSTASENTDDSVSKQLSLDDNL >Mature_453_residues MEKVFRDPVHDYITVNHPVISELIDTAEFQRLRRIKQLGTSSFTFHGAEHTRFSHCLGVYHIAKRITDYFSRNFPLEWNP DENLLTQCAALLHDVGHGAYSHTFEGLFNTDHEAVTQEIITSPDTEINEILRKVSPDFPEKVASVISHEYSNPQVVQLIS SQIDADRMDYLLRDAYFTGAVYGQFDLTWILRVIVPTENGIAFKYSGMHAVEDYIVSRYQMYMQVYFHASSRSMEVLLQK LLARAKFLYASQPDYFAISSPCLVPFFEQNHNLQDYLRLDDGVMNTYFQVWMSHDDEILADLASAYVNRHLLKSITFDPK TVELEDLEILSSLVEEAGFNPDYYTGIHSNYDLPYDFYRPSSEKPRTEINILQKNGSLTELSVLSPLIKSLTGTIHGNSR FYFPKIMLENPEFTKYIVNDSLVINQNFTDRNSTASENTDDSVSKQLSLDDNL
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=280, Percent_Identity=27.1428571428571, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17537829, Length=301, Percent_Identity=28.2392026578073, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17537827, Length=301, Percent_Identity=28.2392026578073, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24666702, Length=269, Percent_Identity=26.7657992565056, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221512937, Length=269, Percent_Identity=26.7657992565056, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52155; Mature: 52155
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVFRDPVHDYITVNHPVISELIDTAEFQRLRRIKQLGTSSFTFHGAEHTRFSHCLGVY CCCHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH HIAKRITDYFSRNFPLEWNPDENLLTQCAALLHDVGHGAYSHTFEGLFNTDHEAVTQEII HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH TSPDTEINEILRKVSPDFPEKVASVISHEYSNPQVVQLISSQIDADRMDYLLRDAYFTGA CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCE VYGQFDLTWILRVIVPTENGIAFKYSGMHAVEDYIVSRYQMYMQVYFHASSRSMEVLLQK EECCHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLARAKFLYASQPDYFAISSPCLVPFFEQNHNLQDYLRLDDGVMNTYFQVWMSHDDEILA HHHHHHHHHCCCCCCEEECCCCEEEHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHH DLASAYVNRHLLKSITFDPKTVELEDLEILSSLVEEAGFNPDYYTGIHSNYDLPYDFYRP HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SSEKPRTEINILQKNGSLTELSVLSPLIKSLTGTIHGNSRFYFPKIMLENPEFTKYIVND CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCEEEECEEEECCCCCEEEEECC SLVINQNFTDRNSTASENTDDSVSKQLSLDDNL EEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MEKVFRDPVHDYITVNHPVISELIDTAEFQRLRRIKQLGTSSFTFHGAEHTRFSHCLGVY CCCHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH HIAKRITDYFSRNFPLEWNPDENLLTQCAALLHDVGHGAYSHTFEGLFNTDHEAVTQEII HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH TSPDTEINEILRKVSPDFPEKVASVISHEYSNPQVVQLISSQIDADRMDYLLRDAYFTGA CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCE VYGQFDLTWILRVIVPTENGIAFKYSGMHAVEDYIVSRYQMYMQVYFHASSRSMEVLLQK EECCHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLARAKFLYASQPDYFAISSPCLVPFFEQNHNLQDYLRLDDGVMNTYFQVWMSHDDEILA HHHHHHHHHCCCCCCEEECCCCEEEHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHH DLASAYVNRHLLKSITFDPKTVELEDLEILSSLVEEAGFNPDYYTGIHSNYDLPYDFYRP HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SSEKPRTEINILQKNGSLTELSVLSPLIKSLTGTIHGNSRFYFPKIMLENPEFTKYIVND CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCEEEECEEEECCCCCEEEEECC SLVINQNFTDRNSTASENTDDSVSKQLSLDDNL EEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 7934828 [H]