Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yidF
Identifier: 15672805
GI number: 15672805
Start: 836750
End: 837040
Strand: Reverse
Name: yidF
Synonym: L36774
Alternate gene names: 15672805
Gene position: 837040-836750 (Counterclockwise)
Preceding gene: 15672806
Following gene: 15672804
Centisome position: 35.38
GC content: 38.14
Gene sequence:
>291_bases ATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGA AGTCAGCCAAGAGCTTGAGGTTCATGCCAATAGTCTTTATCGCTGGGTTCAAGAAGTTGAAGAATATGGAGAAAGTGCTT TTCCAGGCAATGGGACAGCCCTAGCTGATGCCCAACATAAGATTAAATTGTTAGAGAAAGAAAATCGTTATCTTCAGGAG GAACTTGAACTTCTAAAAAAGTTCCGGGTCTTCTTGAAGCGAAGCAAGTAA
Upstream 100 bases:
>100_bases TTTCGCTTGAATTACCAAAACAATTAAAAAAATCCAAGTATTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAG AAATCGTGGAAAGGTTTATT
Downstream 100 bases:
>100_bases AACGTTTTGAATTTCTCTTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTCGCTCA GGTTTCTATGAATACATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase AB Of IS; Transposase IS; Transposase OrfA For Insertion Sequence Element
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQE ELELLKKFRVFLKRSK
Sequences:
>Translated_96_residues MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQE ELELLKKFRVFLKRSK >Mature_95_residues ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQEE LELLKKFRVFLKRSK
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11333; Mature: 11202
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA