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The map label for this gene is apl

Identifier: 15672695

GI number: 15672695

Start: 719010

End: 719654

Strand: Reverse

Name: apl

Synonym: L119032

Alternate gene names: 15672695

Gene position: 719654-719010 (Counterclockwise)

Preceding gene: 15672696

Following gene: 15672694

Centisome position: 30.42

GC content: 37.05

Gene sequence:

>645_bases
ATGCAAGAAATAATTATCCAAGTCATGAACCAATTTGGCTACTTTGGTGTTGCCTTTCTCATTATGATTGAGAACATCTT
CCCACCAATTCCTTCCGAAGTAATCTTAACTTTCGGTGGTTTCATGACTACTTATAGCGAACTGGGGATTATCGGCATGA
TTATCGCAGCCACTATTGGTTCTGTGCTTGGTGCATTGATACTCTACTTCGTCGGTCGTCTTTTAAGCGTTGAACGCTTA
GAAAAATTAGTTTCTGGACGTTTAGGAAAAGTACTTCGTCTTAAACCAGAGGACATCACAAAAGCTGAAAAATGGTTTTT
AAAGAGAGGATATGCAACAATCTTCTTCTGTCGATTCATTCCTTTAATTAGAAGTCTAATTTCAATCCCTGCTGGTTCTG
CTAAAATGAAACTCCCAAGTTTTCTTATTTTAACAACCTTGGGAACACTTATTTGGAACATTGTTCTAGTGTGCCTTGGA
GCCGCTCTTGGTGATAACTGGGAGATGATTGCTGGAATTCTTGATTCTTACTCTTCAGTTGTGGTTGTGATTTTAGGGAT
TATTTTCATCCTTGCGATTCTTATCTTTGTCAAGAAACGATTTTTCCCCAAAAATAAAAACTATTCATCTGATACAGAAA
AATAA

Upstream 100 bases:

>100_bases
AAGACAAAGCCTATTTTTTGTACTTTATATTTTTATATTGTTTGGTGGCCTTCCAGCCTTATGTTAGAATTAAAGTAATA
GACAAATAAAAGGAGTATTA

Downstream 100 bases:

>100_bases
GCTTAAATGCTTATTTTTTTTATAAAATTTCATTAACTTTTGTTATAATTGGTAATACAAAGGAGATTTTATGGTATCTA
AAGGGCGTTTAGCCGGTTTT

Product: alkaline phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTTYSELGIIGMIIAATIGSVLGALILYFVGRLLSVERL
EKLVSGRLGKVLRLKPEDITKAEKWFLKRGYATIFFCRFIPLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLG
AALGDNWEMIAGILDSYSSVVVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK

Sequences:

>Translated_214_residues
MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTTYSELGIIGMIIAATIGSVLGALILYFVGRLLSVERL
EKLVSGRLGKVLRLKPEDITKAEKWFLKRGYATIFFCRFIPLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLG
AALGDNWEMIAGILDSYSSVVVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK
>Mature_214_residues
MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTTYSELGIIGMIIAATIGSVLGALILYFVGRLLSVERL
EKLVSGRLGKVLRLKPEDITKAEKWFLKRGYATIFFCRFIPLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLG
AALGDNWEMIAGILDSYSSVVVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APL_LACLA (Q9CHL6)

Other databases:

- EMBL:   AE005176
- PIR:   A86714
- RefSeq:   NP_266869.1
- GeneID:   1114338
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L119032
- NMPDR:   fig|272623.1.peg.731
- HOGENOM:   HBG657460
- OMA:   AVFLCRM
- ProtClustDB:   CLSK697368
- BioCyc:   LLAC272623:L119032-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 23822; Mature: 23822

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xda0916c)-; HASH(0xdbee1a4)-; HASH(0xd275264)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTTYSELGIIGMIIAATIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLGALILYFVGRLLSVERLEKLVSGRLGKVLRLKPEDITKAEKWFLKRGYATIFFCRFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLGAALGDNWEMIAGILDSYSSV
HHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
>Mature Secondary Structure
MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTTYSELGIIGMIIAATIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLGALILYFVGRLLSVERLEKLVSGRLGKVLRLKPEDITKAEKWFLKRGYATIFFCRFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLGAALGDNWEMIAGILDSYSSV
HHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471