Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yhbH
Identifier: 15672694
GI number: 15672694
Start: 718328
End: 718939
Strand: Reverse
Name: yhbH
Synonym: L118350
Alternate gene names: NA
Gene position: 718939-718328 (Counterclockwise)
Preceding gene: 15672695
Following gene: 15672668
Centisome position: 30.39
GC content: 34.31
Gene sequence:
>612_bases ATGGTATCTAAAGGGCGTTTAGCCGGTTTTATTGATGCAATTATTGCAGTAATAATGACTATTATGTTATTAGAATTCGA ATTACCTAAAACAGGTGGAATTCTTGATTTTTTGAAAGATAATCTCGTCTATCTGATTGCTTATCTTTTGAGTTTTATCT ATGTTACAACTTCTTGGTTTAATCAACAATATATGCTTTCACAGGCTGAGAAAATCACTCGTCGAATCTATCATAGTTGC ATGATTTGGGTACTCTCATTATCAATGCTTCCTGTACTTTCTGCTTGGGCTGGACGCACAATGGACTTCTTTCAAGATTT CGGAATCCACTCACCAAAAGCCCCTGCCCTACTCTTTATCGTGATGATTTATATTTGGGGATTTGCATATAGTTATATGA CCGATTGTTTTATTGCTGACAATCCTAAAGAAAAGGCTGAACTAATCGCTCAAATGGATGTTTATCACTATTTACGGAAT CCTTTTTGGAAGATTGGAATGGTCATTAGCTTCATTATCACTTTCTTCTATCCCCCTTTTGTATTCATTTATACAGCAGG AGAAATGATTATTGCAACAATAAGAAGTCAAAATAAAAAAAGCTCAACTTAA
Upstream 100 bases:
>100_bases AAAAACTATTCATCTGATACAGAAAAATAAGCTTAAATGCTTATTTTTTTTATAAAATTTCATTAACTTTTGTTATAATT GGTAATACAAAGGAGATTTT
Downstream 100 bases:
>100_bases ATCGTTGAGCTTTTTAGTTTATTGACCAACAGTCAATTGTTCTGAAACATACTTAGCATAGAGTGGATGTGTGGCAACAA GTTCATTATGTTTGCCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVYLIAYLLSFIYVTTSWFNQQYMLSQAEKITRRIYHSC MIWVLSLSMLPVLSAWAGRTMDFFQDFGIHSPKAPALLFIVMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRN PFWKIGMVISFIITFFYPPFVFIYTAGEMIIATIRSQNKKSST
Sequences:
>Translated_203_residues MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVYLIAYLLSFIYVTTSWFNQQYMLSQAEKITRRIYHSC MIWVLSLSMLPVLSAWAGRTMDFFQDFGIHSPKAPALLFIVMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRN PFWKIGMVISFIITFFYPPFVFIYTAGEMIIATIRSQNKKSST >Mature_203_residues MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVYLIAYLLSFIYVTTSWFNQQYMLSQAEKITRRIYHSC MIWVLSLSMLPVLSAWAGRTMDFFQDFGIHSPKAPALLFIVMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRN PFWKIGMVISFIITFFYPPFVFIYTAGEMIIATIRSQNKKSST
Specific function: Unknown
COG id: COG3548
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23513; Mature: 23513
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVYLIAYLLSFIYVTTSWF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQYMLSQAEKITRRIYHSCMIWVLSLSMLPVLSAWAGRTMDFFQDFGIHSPKAPALLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH VMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRNPFWKIGMVISFIITFFYPPF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VFIYTAGEMIIATIRSQNKKSST HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVYLIAYLLSFIYVTTSWF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQYMLSQAEKITRRIYHSCMIWVLSLSMLPVLSAWAGRTMDFFQDFGIHSPKAPALLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH VMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRNPFWKIGMVISFIITFFYPPF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VFIYTAGEMIIATIRSQNKKSST HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA