| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ygaJ
Identifier: 15672603
GI number: 15672603
Start: 607217
End: 607780
Strand: Direct
Name: ygaJ
Synonym: L7226
Alternate gene names: NA
Gene position: 607217-607780 (Clockwise)
Preceding gene: 15672602
Following gene: 15672604
Centisome position: 25.67
GC content: 35.11
Gene sequence:
>564_bases ATGTCAAAAAAAACAGGATTTCTAGTTGGTGCTTTAGTTGGTGCCGCAGCTGCTCTATTTTTAGCTCCTAAAAAAGGAAG CGAACTCCGCGAAGGGGCTGGAAAAATTTATGATGATTTAAAAGAAAACCCTCAAGAAACATTGACTGGAATGAGAGATA CTGCTCTTGATTTCTCAGCTGAAAAATTTAATGATATCAAAGAAAAATTTGATTCAGGTGAAATTTCAGCTGACAAGGCC AAAGAATTTTTGCTTTCAAAACGTGATTTAATTATGGAAAAAGTTGACTCAGGTGAACTGTCTAAAGATTCAGTTGTTGA TTTCTTCAATGATACTAAAGATGCTGTCGTTGAAAAAATTAATTCAATGAAAGACAGTGGAGAAGAACTCTTCGATGAAA ATGAATCAGACATCTCAGAAGAAGCCGCAGAAGTTGTGGCTAAGTTCAGAGATGCCAAAGATGAAGTGAAAGAAGATATT GATACTGAGTCTCTTGCTGAAGAAGCGAAAAAAATTGCTGACAAAGCCAAAGAATTAACAAATTTTCCAGACGAAAAAGA ATAA
Upstream 100 bases:
>100_bases TTTTGGCAAAAACAGCCAAAAAATTCTTTGTTAAAAAAGATAAAACTGAAGCGGGTGTAAAAGTAAATTAAACTTGCTTA CGAAAGAAAGGACTTAACCG
Downstream 100 bases:
>100_bases AATTTAAAATCTGTCTTTAAGGCAGATTTTTTTGTCATGTAAAATATTTACATACTTAACTATGGTAATTGGAAATAAAT TGCGTTATACTATATAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENPQETLTGMRDTALDFSAEKFNDIKEKFDSGEISADKA KEFLLSKRDLIMEKVDSGELSKDSVVDFFNDTKDAVVEKINSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDI DTESLAEEAKKIADKAKELTNFPDEKE
Sequences:
>Translated_187_residues MSKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENPQETLTGMRDTALDFSAEKFNDIKEKFDSGEISADKA KEFLLSKRDLIMEKVDSGELSKDSVVDFFNDTKDAVVEKINSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDI DTESLAEEAKKIADKAKELTNFPDEKE >Mature_186_residues SKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENPQETLTGMRDTALDFSAEKFNDIKEKFDSGEISADKAK EFLLSKRDLIMEKVDSGELSKDSVVDFFNDTKDAVVEKINSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDID TESLAEEAKKIADKAKELTNFPDEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20660; Mature: 20529
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENPQETLTGMRDTALDFSA CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EKFNDIKEKFDSGEISADKAKEFLLSKRDLIMEKVDSGELSKDSVVDFFNDTKDAVVEKI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHH NSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDIDTESLAEEAKKIADKAKELT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH NFPDEKE CCCCCCC >Mature Secondary Structure SKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENPQETLTGMRDTALDFSA CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EKFNDIKEKFDSGEISADKAKEFLLSKRDLIMEKVDSGELSKDSVVDFFNDTKDAVVEKI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHH NSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDIDTESLAEEAKKIADKAKELT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH NFPDEKE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA