| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ygaI
Identifier: 15672602
GI number: 15672602
Start: 606768
End: 607187
Strand: Direct
Name: ygaI
Synonym: L6768
Alternate gene names: NA
Gene position: 606768-607187 (Clockwise)
Preceding gene: 15672601
Following gene: 15672603
Centisome position: 25.65
GC content: 37.14
Gene sequence:
>420_bases GTGGGAAATATTGCATTATTGATTATCGCGATAGCATTTGCTGTATTGGTGGTCTTCTTAGTTATTGTATTACATAAAGT TTCTAAGGTTGTTGAAGAAGCCAACCGTACGGTTAAATTAGTTTCTAGCGATGTAGATGTCTTACTTCATCAAGCTGATG GCATAATGACTAAAGCCAATACCTTGCTTGATGATGTTAATGGGAAAGTCGCCACGATTGACCCTTTGTTTACAGCGGTT GCTGACTTGTCTGAAAGTGTTTCAGACATCAATGCTTCAAGTCGTAAACTTGTGACGCGTCTTAATAGAGGTTCAACAAA ACGAAAAACAACTTCAGCTTCAGCCGTCGTTTTGGCAAAAACAGCCAAAAAATTCTTTGTTAAAAAAGATAAAACTGAAG CGGGTGTAAAAGTAAATTAA
Upstream 100 bases:
>100_bases CAATTTGTTATAATGAAGTCAAATAGAATCGCTTTCATCAAAATGAAAGAAGATTGAAAAAATGGGTGCTGATTTTATAC CCGAATAAAGAGGAGGAAAC
Downstream 100 bases:
>100_bases ACTTGCTTACGAAAGAAAGGACTTAACCGATGTCAAAAAAAACAGGATTTCTAGTTGGTGCTTTAGTTGGTGCCGCAGCT GCTCTATTTTTAGCTCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis-Like Protein; Methyl-Accepting Chemotaxis-Like Domain-Containing Protein; Exported Protein; Methyl-Accepting Chemotaxis Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MGNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSDVDVLLHQADGIMTKANTLLDDVNGKVATIDPLFTAV ADLSESVSDINASSRKLVTRLNRGSTKRKTTSASAVVLAKTAKKFFVKKDKTEAGVKVN
Sequences:
>Translated_139_residues MGNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSDVDVLLHQADGIMTKANTLLDDVNGKVATIDPLFTAV ADLSESVSDINASSRKLVTRLNRGSTKRKTTSASAVVLAKTAKKFFVKKDKTEAGVKVN >Mature_138_residues GNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSDVDVLLHQADGIMTKANTLLDDVNGKVATIDPLFTAVA DLSESVSDINASSRKLVTRLNRGSTKRKTTSASAVVLAKTAKKFFVKKDKTEAGVKVN
Specific function: Unknown
COG id: COG4768
COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14847; Mature: 14715
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSDVDVLLHQADGIMTKAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TLLDDVNGKVATIDPLFTAVADLSESVSDINASSRKLVTRLNRGSTKRKTTSASAVVLAK HHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH TAKKFFVKKDKTEAGVKVN HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSDVDVLLHQADGIMTKAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TLLDDVNGKVATIDPLFTAVADLSESVSDINASSRKLVTRLNRGSTKRKTTSASAVVLAK HHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH TAKKFFVKKDKTEAGVKVN HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA