Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yfdD
Identifier: 15672529
GI number: 15672529
Start: 533116
End: 533397
Strand: Direct
Name: yfdD
Synonym: L133111
Alternate gene names: NA
Gene position: 533116-533397 (Clockwise)
Preceding gene: 15672528
Following gene: 30024001
Centisome position: 22.54
GC content: 32.98
Gene sequence:
>282_bases ATGAAAGAAAATTATAATTATCCTCTTGATTTAAGTTGGAGTACTACTGAAATGACAGAAGTGCTCTCTTTTTTCAATCA AGTTGAAAAATTTTATGAAAGCAAAGTTGAAAAAGAAGTTTTTTTAGAATCCTATAATGCTTTCAAAAAGATTGTTCCCT CAAAAATGCAAGAAAAACAGCTTGGGCGTGATTTTGAACTAAGCAGTGGTTACTCACTTTATCATGCAGTCAAGGAGGTA AAAGCTAGTGGAAAACGATTTGTCAGTGCTGACAAGGCTTGA
Upstream 100 bases:
>100_bases ATAGATTAAGATTTAGGCAGCAAAATTTACTGACAACAATTCTGTCAGTAAATTTTTGCTGAATTTTATAGATTTTTTAG CCTGAACGGGCAGGAGAAGC
Downstream 100 bases:
>100_bases ATTAGCTAAAGATTGGGTAAGAGATGCTGGAAATTTCTTAAAAGAAAATATAGCTGCTCCGTTGGAAATTACTGAAAAGA CTCGCTATGATGACTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLESYNAFKKIVPSKMQEKQLGRDFELSSGYSLYHAVKEV KASGKRFVSADKA
Sequences:
>Translated_93_residues MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLESYNAFKKIVPSKMQEKQLGRDFELSSGYSLYHAVKEV KASGKRFVSADKA >Mature_93_residues MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLESYNAFKKIVPSKMQEKQLGRDFELSSGYSLYHAVKEV KASGKRFVSADKA
Specific function: Unknown
COG id: COG4476
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0223 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007920 - ProDom: PD062738 [H]
Pfam domain/function: PF05256 UPF0223 [H]
EC number: NA
Molecular weight: Translated: 10881; Mature: 10881
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLESYNAFKKIVPSKMQEKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRDFELSSGYSLYHAVKEVKASGKRFVSADKA CCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCC >Mature Secondary Structure MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLESYNAFKKIVPSKMQEKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRDFELSSGYSLYHAVKEVKASGKRFVSADKA CCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA