Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yfdB
Identifier: 15672527
GI number: 15672527
Start: 531954
End: 532478
Strand: Direct
Name: yfdB
Synonym: L131937
Alternate gene names: NA
Gene position: 531954-532478 (Clockwise)
Preceding gene: 15672523
Following gene: 15672528
Centisome position: 22.49
GC content: 29.9
Gene sequence:
>525_bases ATGAATTCACTACTAATCATGGGTTATACAAGTTTTGACCTAGGTATTTTCAATGAAAAAGACATAAAAGTATCAATAAT AAAAAAAACAATTAGAAGAAAATTAATTAACTTTTTGGAGGAAGGCCTTCGTTGGATTATTTTTACAGGTAATTTGGGTT TTGAATACTGGGCGTTGGAAGTAGCAAAGGAACTTCAGACAGATTATGACTTTCAAATTGGGACAATTTTTTCTTTTGAA ACACATGGCCAAAATTGGAACGAAAGTAATCAAGTTAAGTTGGCAGCTTTCAAACAAGTAGATTTTGTGAAATATGCTTT TGAAACTTATGAAAGTCCAAGCCAATTCCGCCAGTACAATGATTTTATACTGGAAAATACCGAGGGAGCTTTTGTTTTTT ACGATGAAGAAAATGAGACAAAATTAAAATATATGGTTGAAAAAATGAAACAAAACACTAATTATGAAGTTTATTTGCTT GATTTTGAAGATTTACAAGAAACTTTTGAAGAAATGAATGAGTGA
Upstream 100 bases:
>100_bases CCATTAGGATAATTAACCATTCTGTTTTCTACCTTTATAAAATTCTCAGTTAGTTATATAATGTCTATTATAACATAAAT TTTACAAGGGGAAAATATTT
Downstream 100 bases:
>100_bases TTTCGTAATTTTTAGAAGAAAATAATTACTAAAAATCATAACGTCACTTTTTTTGCGATATTAATTTTGATATAATACTT AGCAGATGTAAATTAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLRWIIFTGNLGFEYWALEVAKELQTDYDFQIGTIFSFE THGQNWNESNQVKLAAFKQVDFVKYAFETYESPSQFRQYNDFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLL DFEDLQETFEEMNE
Sequences:
>Translated_174_residues MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLRWIIFTGNLGFEYWALEVAKELQTDYDFQIGTIFSFE THGQNWNESNQVKLAAFKQVDFVKYAFETYESPSQFRQYNDFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLL DFEDLQETFEEMNE >Mature_174_residues MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLRWIIFTGNLGFEYWALEVAKELQTDYDFQIGTIFSFE THGQNWNESNQVKLAAFKQVDFVKYAFETYESPSQFRQYNDFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLL DFEDLQETFEEMNE
Specific function: Unknown
COG id: COG4474
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0398 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010697 [H]
Pfam domain/function: PF06908 DUF1273 [H]
EC number: NA
Molecular weight: Translated: 20858; Mature: 20858
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLRWIIFTGNLGFEYWALE CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH VAKELQTDYDFQIGTIFSFETHGQNWNESNQVKLAAFKQVDFVKYAFETYESPSQFRQYN HHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHC DFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLLDFEDLQETFEEMNE CCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLRWIIFTGNLGFEYWALE CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH VAKELQTDYDFQIGTIFSFETHGQNWNESNQVKLAAFKQVDFVKYAFETYESPSQFRQYN HHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHC DFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLLDFEDLQETFEEMNE CCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA