Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is pepA
Identifier: 15672369
GI number: 15672369
Start: 393898
End: 394965
Strand: Reverse
Name: pepA
Synonym: L193909
Alternate gene names: 15672369
Gene position: 394965-393898 (Counterclockwise)
Preceding gene: 15672377
Following gene: 15672367
Centisome position: 16.7
GC content: 39.33
Gene sequence:
>1068_bases ATGGAACTATTCGACAAAGTAAAAGCACTGACAGAAATTCAAGCGACTTCTGGTTTTGAGGGATCTGTTCGTGACTATTT AAAAACACGCATGATTGCTCTTGGTTACCAGCCAGAATTTGATGGGCTTGGTGGTATATTTGTCACTAAAACTTCAAAAG TAGCAAATGCCCCACGTATTATGATTGCAGCCCACATGGATGAAGTTGGCTTTATGGTCAGCTCAATCAAAGCTGACGGA ACATTCCGGGTCGTTCCACTTGGTGGTTGGAATCCTTTAGTTGTCTCTGGACAACGTTTTACATTATTCACACGTACAGG TAAAAAAATTCCTGTCGTAACTGGTGGGCTTCCTCCACATCTTCTTCGTGGAACTGGTGTTACTCCTCAAATTCCTGCCA TTTCTGATATTGTCTTTGATGGAGCTTTTGAGAATGCTGCAGAAGCTACAGAATTTGGAATCGCTCAAGGCGATGTAATC ATTCCAGAAACTGAAACAATTCTCTCTGCTAATGGTAAAAATATTATTTCTAAAGCTTGGGACAATCGTTACGGTTGTTT AATGATTCTTGAACTTCTTGGATTTTTAGCTGACAAAGAATTACCTGCTACATTGATTATCGGAGCCAATGTTCAAGAAG AAGTTGGCCTTCGTGGAGCCAAAGTTTCTACAACTATGTTCAAGCCTGATTTGTTCTTTGCTGTTGATTGTTCACCTGCT AGTGATACGTTTGGTGATGACAACGGTCGTCTTGGAGAAGGAACAACGCTTCGTTTCTTTGACCCAGGTCATATTATGCT CCCTGGAATGAAAAATTTCTTGCTTGAAACTGCTGATAAGGCTAAAGTTAAAACCCAAGTTTATATGGCTAAAGGTGGAA CTGATGCAGGTGCTGCCCACTTAGCTAATAATGGAGTCCCTTCAACAACGATTGGTGTTGTTGCTCGTTATATTCACAGT CATCAAACAATTTTCAATATTGATGATTTCAATCAAGCACAAACTTTCTTGAGAAATATCGTAACATCACTTAGTACTGA AAAAGTAGCTGAAATTAAAAACTATTAA
Upstream 100 bases:
>100_bases GGAAATTTTAACATATTTCTTGGTATAATTATAGTGTAAATCATCAAAATTTTTGCTGACAAATCTGTCAGTAAATTTTT CAGTATTCCGGAGGAGAAAA
Downstream 100 bases:
>100_bases ATTTAAAAAACAAAAGAAAAAATCACTAGGAAACCTATCCTAGTGATTTTTTGTATTTTATTGACCAAAGTTATAATTAG GCAATATCTTTTTCCAACCA
Product: glutamyl aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLGGIFVTKTSKVANAPRIMIAAHMDEVGFMVSSIKADG TFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPHLLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVI IPETETILSANGKNIISKAWDNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLRGAKVSTTMFKPDLFFAVDCSPA SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLETADKAKVKTQVYMAKGGTDAGAAHLANNGVPSTTIGVVARYIHS HQTIFNIDDFNQAQTFLRNIVTSLSTEKVAEIKNY
Sequences:
>Translated_355_residues MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLGGIFVTKTSKVANAPRIMIAAHMDEVGFMVSSIKADG TFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPHLLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVI IPETETILSANGKNIISKAWDNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLRGAKVSTTMFKPDLFFAVDCSPA SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLETADKAKVKTQVYMAKGGTDAGAAHLANNGVPSTTIGVVARYIHS HQTIFNIDDFNQAQTFLRNIVTSLSTEKVAEIKNY >Mature_355_residues MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLGGIFVTKTSKVANAPRIMIAAHMDEVGFMVSSIKADG TFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPHLLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVI IPETETILSANGKNIISKAWDNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLRGAKVSTTMFKPDLFFAVDCSPA SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLETADKAKVKTQVYMAKGGTDAGAAHLANNGVPSTTIGVVARYIHS HQTIFNIDDFNQAQTFLRNIVTSLSTEKVAEIKNY
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=352, Percent_Identity=33.8068181818182, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788727, Length=353, Percent_Identity=32.0113314447592, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI87082417, Length=342, Percent_Identity=28.3625730994152, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017538 - InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: =3.4.11.7 [H]
Molecular weight: Translated: 38271; Mature: 38271
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLGGIFVTKTSKVANAPRI CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEECHHHCCCCEE MIAAHMDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPH EEEECHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCCCHH LLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVIIPETETILSANGKNIISKAW HHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCHHEEECCCCHHHHHHH DNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLRGAKVSTTMFKPDLFFAVDCSPA CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCEEEEEEECCCEEEEEECCCC SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLETADKAKVKTQVYMAKGGTDAGAAH CCCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHCCCCCEEEEEEEEECCCCCCCHHH LANNGVPSTTIGVVARYIHSHQTIFNIDDFNQAQTFLRNIVTSLSTEKVAEIKNY HHCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLGGIFVTKTSKVANAPRI CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEECHHHCCCCEE MIAAHMDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPH EEEECHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCCCHH LLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVIIPETETILSANGKNIISKAW HHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCHHEEECCCCHHHHHHH DNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLRGAKVSTTMFKPDLFFAVDCSPA CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCEEEEEEECCCEEEEEECCCC SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLETADKAKVKTQVYMAKGGTDAGAAH CCCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHCCCCCEEEEEEEEECCCCCCCHHH LANNGVPSTTIGVVARYIHSHQTIFNIDDFNQAQTFLRNIVTSLSTEKVAEIKNY HHCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535515 [H]