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The map label for this gene is yciD

Identifier: 15672268

GI number: 15672268

Start: 286731

End: 287174

Strand: Direct

Name: yciD

Synonym: L86677

Alternate gene names: 15672268

Gene position: 286731-287174 (Clockwise)

Preceding gene: 15672267

Following gene: 15672269

Centisome position: 12.12

GC content: 33.78

Gene sequence:

>444_bases
GTGTTAACTAATCAAGAATTGACAGCAAAAGTAAAAGAAATATCACTCACATATTTTAAGCAATCATTTGACCACGAAGC
AAAATGGAATCAACGCCTACGGACAACTGGTGGTCGTTTCTTTCCCAAAGATTTACATCTAGATTTTAATCCTAAAATGG
CTGAACTTAAAGATTTTGAAGGAGTGATACTTCATGAATTAACTCATTATCATCTGTATCGGTCTAAAAGAGGTTATAAA
CATCGAGATGCTGATTTTAAAAGGCTTCTGTCACAAGTTGGTGGCTTACGATATGCTCCCTCAGTGATTGATAAGAAGAT
AAAATATTATTATAGCTGTCAAAATTGCGGCCAACTTTATCCTCGACAAAGAAAAATTGATACAAAAAAGTATCGCTGTG
GAAAATGTCGAGGGAAATTAATCTTAAAAACAAGCGGAAATTAA

Upstream 100 bases:

>100_bases
ATAATCTGTCAGTAAATTTTTTTGATTCTAGTTTCATTAAGCGAAGCTGTCAGTAAAATTTACTGACAGTCGTTTGTGCG
AGCCTGTCAAAGGAGGAAAA

Downstream 100 bases:

>100_bases
AAATTCCGCTTGTTTTTTATTAAGAATTAAGAAATTTATCCACATTTTCTTCACTTTTCCCCAAAAACTGTGAATAAGTT
AAGATAAATTGGGGATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELKDFEGVILHELTHYHLYRSKRGYK
HRDADFKRLLSQVGGLRYAPSVIDKKIKYYYSCQNCGQLYPRQRKIDTKKYRCGKCRGKLILKTSGN

Sequences:

>Translated_147_residues
MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELKDFEGVILHELTHYHLYRSKRGYK
HRDADFKRLLSQVGGLRYAPSVIDKKIKYYYSCQNCGQLYPRQRKIDTKKYRCGKCRGKLILKTSGN
>Mature_147_residues
MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELKDFEGVILHELTHYHLYRSKRGYK
HRDADFKRLLSQVGGLRYAPSVIDKKIKYYYSCQNCGQLYPRQRKIDTKKYRCGKCRGKLILKTSGN

Specific function: Unknown

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPRTL_LACLA (Q9CIS0)

Other databases:

- EMBL:   AE005176
- PIR:   F86660
- RefSeq:   NP_266442.1
- GeneID:   1113896
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L86677
- NMPDR:   fig|272623.1.peg.294
- HOGENOM:   HBG313700
- OMA:   HELVHYH
- ProtClustDB:   PRK04351
- BioCyc:   LLAC272623:L86677-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00745
- InterPro:   IPR006640
- SMART:   SM00731

Pfam domain/function: PF10263 SprT-like

EC number: NA

Molecular weight: Translated: 17455; Mature: 17455

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: ACT_SITE 66-66

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELKDFE
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
GVILHELTHYHLYRSKRGYKHRDADFKRLLSQVGGLRYAPSVIDKKIKYYYSCQNCGQLY
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCC
PRQRKIDTKKYRCGKCRGKLILKTSGN
CCCCCCCCHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKDLHLDFNPKMAELKDFE
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
GVILHELTHYHLYRSKRGYKHRDADFKRLLSQVGGLRYAPSVIDKKIKYYYSCQNCGQLY
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCC
PRQRKIDTKKYRCGKCRGKLILKTSGN
CCCCCCCCHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471