Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pgk
Identifier: 15672227
GI number: 15672227
Start: 242796
End: 243992
Strand: Direct
Name: pgk
Synonym: L0010
Alternate gene names: 15672227
Gene position: 242796-243992 (Clockwise)
Preceding gene: 15672226
Following gene: 30023982
Centisome position: 10.26
GC content: 41.1
Gene sequence:
>1197_bases ATGGCAAAATTGACTGTAAAAGACGTTGAACTTAAAGGCAAAAAAGTCCTCGTACGTGTTGACTTTAATGTTCCAATTAA AGATGGCGTAATCACAAATGATAACCGTATCACTGCTGCGCTTCCAACAATTAAATACATCCTTGAACAAGGTGGACGTG CAGTCCTCTTCTCTCACTTGGGACGTGTTAAAGAAGAAGCTGACAAAGCTGGTAAATCACTTGCACCAGTAGCTAAAGCT CTTTCTGAAAAACTTGGTCAAGATGTTGTTTTCCCAGGAACTACTCGTGGCGCAGAACTTGAAGCAGCAATCAACGAACT TAAAGATGGAGAAATCCTTCTCGTTGAAAACACTCGTTTTGAAGACATCGACGGTAAAAAAGAATCTAAAAACGACCCAG AACTTGGTAAATACTGGGCTTCACTTGGTGACGGAATCTTCGTTAATGACGCATTTGGTACAGCTCACCGTGCTCATGCA TCAAACGTTGGTATCTCAGCAAACGTTGATAAAGCCGTTGCTGGTTTCCTTCTTGAAAACGAAATTGCTTATATCCAAGA AGCAGTTGAAGCTCCAGAACGTCCATTCGTAGCAATCCTTGGTGGTTCAAAAGTTTCAGATAAAATCGGTGTTATCGAAA ACCTTCTTTCAAAAGCTGATAAAGTTATCATCGGTGGTGGGATGGCTTACACATTCTTGAAAGCTCAAGGTTACGAAATC GGAACTTCACTCGTTGAAGATGACAAACTTGATCTTGCTAAAGAATTGCTTGAAAAAGCAGCTGGAAAATTGATTTTGCC ACTTGACCACAAAGTTGCTAACGCATTTGCTGGTTACACAGAAGTTAAAGAAACTGCTGACCAAAATATTCCTGCAGGCT TCATGGGACTTGACGTAGCAAGCAAAACAATTGCTGACTACAACACACAACTTGAAGGTGCTAAAACAGTTGTTTGGAAT GGTCCAGTTGGTGTATTTGAAAACACAGACTTCCAAGCAGGTACTGTTGGATTGATGGAAGCTATCGTTAAACAACCAGG TGTTAAATCAATCATCGGTGGTGGTGACTCAGCAGCAGCAGCAATCAACCTTGGTTATGCAGATAAATTCTCATGGATTT CAACTGGTGGTGGAGCTTCAATGGAACTCCTCGAAGGTAAAGTACTTCCAGGACTTGCAGCTTTGACTGAAAAATAA
Upstream 100 bases:
>100_bases TATTCGAATTTGTGATATAATTAACCTATCGATTTGAATTGAATCAGCATGGTGCTTTTTCAATCTCAACAAAAATATCT TATAAGGAGAATTTTTCCAA
Downstream 100 bases:
>100_bases TCTAAAAGCTAATAAATAAAAAGAGTTTGATTTTTGAAATCAAGCTCTTTTTATATCTGTGCTATAATTTGGTTATATGA AATTCTATAATTCAACAAAT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MAKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTIKYILEQGGRAVLFSHLGRVKEEADKAGKSLAPVAKA LSEKLGQDVVFPGTTRGAELEAAINELKDGEILLVENTRFEDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHA SNVGISANVDKAVAGFLLENEIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEI GTSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVASKTIADYNTQLEGAKTVVWN GPVGVFENTDFQAGTVGLMEAIVKQPGVKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKVLPGLAALTEK
Sequences:
>Translated_398_residues MAKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTIKYILEQGGRAVLFSHLGRVKEEADKAGKSLAPVAKA LSEKLGQDVVFPGTTRGAELEAAINELKDGEILLVENTRFEDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHA SNVGISANVDKAVAGFLLENEIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEI GTSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVASKTIADYNTQLEGAKTVVWN GPVGVFENTDFQAGTVGLMEAIVKQPGVKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKVLPGLAALTEK >Mature_397_residues AKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTIKYILEQGGRAVLFSHLGRVKEEADKAGKSLAPVAKAL SEKLGQDVVFPGTTRGAELEAAINELKDGEILLVENTRFEDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHAS NVGISANVDKAVAGFLLENEIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEIG TSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVASKTIADYNTQLEGAKTVVWNG PVGVFENTDFQAGTVGLMEAIVKQPGVKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKVLPGLAALTEK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=413, Percent_Identity=46.2469733656174, Blast_Score=328, Evalue=5e-90, Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=44.7941888619855, Blast_Score=319, Evalue=3e-87, Organism=Escherichia coli, GI1789294, Length=398, Percent_Identity=43.21608040201, Blast_Score=283, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17508823, Length=416, Percent_Identity=48.0769230769231, Blast_Score=340, Evalue=1e-93, Organism=Saccharomyces cerevisiae, GI6319857, Length=415, Percent_Identity=47.4698795180723, Blast_Score=337, Evalue=2e-93, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=45.3012048192771, Blast_Score=315, Evalue=3e-86, Organism=Drosophila melanogaster, GI17136394, Length=415, Percent_Identity=46.7469879518072, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_LACLA (Q9CIW1)
Other databases:
- EMBL: AE005176 - PIR: E86655 - RefSeq: NP_266401.1 - ProteinModelPortal: Q9CIW1 - PhosSite: Q9CIW1 - GeneID: 1113855 - GenomeReviews: AE005176_GR - KEGG: lla:L0010 - NMPDR: fig|272623.1.peg.253 - HOGENOM: HBG453500 - OMA: DCIGDEV - ProtClustDB: PRK00073 - BioCyc: LLAC272623:L0010-MONOMER - BRENDA: 2.7.2.3 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42070; Mature: 41939
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 119-119 BINDING 157-157 BINDING 208-208 BINDING 296-296 BINDING 327-327
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTIKYILEQGGRAVLFSHL CCCEEEEEEEECCCEEEEEEECCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCEEHHHHH GRVKEEADKAGKSLAPVAKALSEKLGQDVVFPGTTRGAELEAAINELKDGEILLVENTRF HHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEEECCCC EDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVDKAVAGFLLEN CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH EIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEI HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCC GTSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVA CCHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHH SKTIADYNTQLEGAKTVVWNGPVGVFENTDFQAGTVGLMEAIVKQPGVKSIIGGGDSAAA HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEE AINLGYADKFSWISTGGGASMELLEGKVLPGLAALTEK EEECCCCCCCCEEECCCCCCHHHHCCCCCCCHHHHCCC >Mature Secondary Structure AKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTIKYILEQGGRAVLFSHL CCEEEEEEEECCCEEEEEEECCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCEEHHHHH GRVKEEADKAGKSLAPVAKALSEKLGQDVVFPGTTRGAELEAAINELKDGEILLVENTRF HHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEEECCCC EDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVDKAVAGFLLEN CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH EIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEI HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCC GTSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVA CCHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHH SKTIADYNTQLEGAKTVVWNGPVGVFENTDFQAGTVGLMEAIVKQPGVKSIIGGGDSAAA HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEE AINLGYADKFSWISTGGGASMELLEGKVLPGLAALTEK EEECCCCCCCCEEECCCCCCHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471