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The map label for this gene is ycbK

Identifier: 15672194

GI number: 15672194

Start: 213324

End: 214751

Strand: Direct

Name: ycbK

Synonym: L13324

Alternate gene names: 15672194

Gene position: 213324-214751 (Clockwise)

Preceding gene: 15672193

Following gene: 15672195

Centisome position: 9.02

GC content: 32.0

Gene sequence:

>1428_bases
ATGAAAAACGAATTTAAAACAGGTATTTTTTTTACTGCAATTGCTCAGTATAGCACAGTCATTGTACAGCTTATAATCAA
TATGATTCTCTCACGATTACTAACCCCAGGAGAAATTGGAATGGTTACCATCGTGCAAGTGATTATATTTTTCTTCCAAC
TTTTAGCCGGATCAGCAATCGGACCCGCTATCATCCAAAACAAAAATTTGAATGAAAAAGACTACGGAATAATTTTTAAC
TATTCTGTTATTTTTGGTATATTTTTGGTTCTTGCTTTTGGCTTTGGAGGGGGAATAATCCTTAGCACTATTTATAGTAA
TCCAATATATATCCCACTATGTTGGGCAATGACGCCTATTATTATGATGAGTTCTATGGTACAAGTTCCTAATGGAATTC
TTGGTAAAGAAAAGCGATTCAAAGAAATAAGTATTCGTTTACTTTTATCAGGTATTTTGGGAGCGATTTTTGGTATTACG
GCAGCTTTTCTACACGCTGGAGTTTATGCAATGGTTCTTGTCTATGTTGTCACTGACTTAACAAGTTTTCTATTGACCTT
TAAAATTGTTAAGATAGATTATACTAGATCTCTAAATTTTAAACCAGTTAGAGAAATTTTACCTTTTGTTAAACATCAGA
CAGGATTCTCCGTTATCAATTATTTTTATCGAAATTTGGACAATTTATTAGTTGGGAAATTTCTTGGCACTACACTGCTA
GGAAATTATTCAAAGGGTTATCAACTTTTATCTTTCCCGATTACAATTTTTTTGAATGTTATCAATCCAGTGATGCAACC
TATTCTGGCTGAACATGAAAAAAATGTTGTATTAATTAGAGATACCTACCTCAAAGTTTGTCGCCTCCTTGCAATTGTTG
CTATTCCAGTTTCAATTTTCTTCTCATTAAATGCGGGTCCTATTATTTATTTACTTTTTGGTAAGCAATGGAGTATGGCA
ATTCTCCCACTTTCTATACTAAGTTTAAGTATTTGTCCCCAAATGTTGTCACAGTCAATGTCTGCAATTTGGCAATCTCG
TAACCTTACTAAAATTCAATCAGTAAGTGGTTTTATTTCTCTTGGAATCATCAGCTTATGTATTTTCATAGGGATTTTAG
GTGGTAACTTAACTAGTGTTTCAATTGCCGTTTCAGGATCATATTTCTTGAATTTTATTGTTTCTGGAAGTCTATTGATG
AGACGTGCCTTAGATAGTAACTTTTTCCAACTTTTTAAAGTGATTATTAAACCACTATTTTTAGGAATCATTTTGAGTGT
TATTGTCATTTTAACCAATCCATATATTAGTTTTTCAAATCTGTTTATCACTCTGTTACTGAGAGGGATTGTTTGGCTAA
TTATTGTTGCACTATTTTTAGTCGTTACAGGAGAATTTAAGAAAATTAAGGAAATGGTAAAAAAATGA

Upstream 100 bases:

>100_bases
ACTCAGTTTCCGATATTTCAAAACTTAAGGACATAGGATACTCACCTAAATTTGATTTATCTAATGGTATGAAAAAGTAC
CTCAACTATGAATTTAAATA

Downstream 100 bases:

>100_bases
AGGAAAAAACAGTTGCAATTTTTAATGGTTATTATATTCCCCATCTTGGAGGAGTAGAACGTTATACTTATAACATCGCT
AAGAAGTTGACTGAAAAGGG

Product: polysaccharide biosynthesis export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKNEFKTGIFFTAIAQYSTVIVQLIINMILSRLLTPGEIGMVTIVQVIIFFFQLLAGSAIGPAIIQNKNLNEKDYGIIFN
YSVIFGIFLVLAFGFGGGIILSTIYSNPIYIPLCWAMTPIIMMSSMVQVPNGILGKEKRFKEISIRLLLSGILGAIFGIT
AAFLHAGVYAMVLVYVVTDLTSFLLTFKIVKIDYTRSLNFKPVREILPFVKHQTGFSVINYFYRNLDNLLVGKFLGTTLL
GNYSKGYQLLSFPITIFLNVINPVMQPILAEHEKNVVLIRDTYLKVCRLLAIVAIPVSIFFSLNAGPIIYLLFGKQWSMA
ILPLSILSLSICPQMLSQSMSAIWQSRNLTKIQSVSGFISLGIISLCIFIGILGGNLTSVSIAVSGSYFLNFIVSGSLLM
RRALDSNFFQLFKVIIKPLFLGIILSVIVILTNPYISFSNLFITLLLRGIVWLIIVALFLVVTGEFKKIKEMVKK

Sequences:

>Translated_475_residues
MKNEFKTGIFFTAIAQYSTVIVQLIINMILSRLLTPGEIGMVTIVQVIIFFFQLLAGSAIGPAIIQNKNLNEKDYGIIFN
YSVIFGIFLVLAFGFGGGIILSTIYSNPIYIPLCWAMTPIIMMSSMVQVPNGILGKEKRFKEISIRLLLSGILGAIFGIT
AAFLHAGVYAMVLVYVVTDLTSFLLTFKIVKIDYTRSLNFKPVREILPFVKHQTGFSVINYFYRNLDNLLVGKFLGTTLL
GNYSKGYQLLSFPITIFLNVINPVMQPILAEHEKNVVLIRDTYLKVCRLLAIVAIPVSIFFSLNAGPIIYLLFGKQWSMA
ILPLSILSLSICPQMLSQSMSAIWQSRNLTKIQSVSGFISLGIISLCIFIGILGGNLTSVSIAVSGSYFLNFIVSGSLLM
RRALDSNFFQLFKVIIKPLFLGIILSVIVILTNPYISFSNLFITLLLRGIVWLIIVALFLVVTGEFKKIKEMVKK
>Mature_475_residues
MKNEFKTGIFFTAIAQYSTVIVQLIINMILSRLLTPGEIGMVTIVQVIIFFFQLLAGSAIGPAIIQNKNLNEKDYGIIFN
YSVIFGIFLVLAFGFGGGIILSTIYSNPIYIPLCWAMTPIIMMSSMVQVPNGILGKEKRFKEISIRLLLSGILGAIFGIT
AAFLHAGVYAMVLVYVVTDLTSFLLTFKIVKIDYTRSLNFKPVREILPFVKHQTGFSVINYFYRNLDNLLVGKFLGTTLL
GNYSKGYQLLSFPITIFLNVINPVMQPILAEHEKNVVLIRDTYLKVCRLLAIVAIPVSIFFSLNAGPIIYLLFGKQWSMA
ILPLSILSLSICPQMLSQSMSAIWQSRNLTKIQSVSGFISLGIISLCIFIGILGGNLTSVSIAVSGSYFLNFIVSGSLLM
RRALDSNFFQLFKVIIKPLFLGIILSVIVILTNPYISFSNLFITLLLRGIVWLIIVALFLVVTGEFKKIKEMVKK

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=328, Percent_Identity=23.780487804878, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 52854; Mature: 52854

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]