Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is yfcK [C]
Identifier: 15668851
GI number: 15668851
Start: 595883
End: 596953
Strand: Reverse
Name: yfcK [C]
Synonym: MJ0670
Alternate gene names: 15668851
Gene position: 596953-595883 (Counterclockwise)
Preceding gene: 15668852
Following gene: 15668850
Centisome position: 35.85
GC content: 28.38
Gene sequence:
>1071_bases GTGAGAGTTATGCTTCCAAACAAAAAAGCCTTAGAAATTATTAGAAAGTATATGAAAATTTACAATGGAAAGAATGAAAA AGATATTAAAGAGAGATTAATTAAAGAGTTAAAGGAAGAACATGTCTTAGTAGAAACTGAGGATGGAACTTACACTTTAA AGGCAGAGGATGAAGAGGAGATGATGCATTCAAAGGTTGGAGCTTTAAAAGAAGCAATTTATAAGTTTGCTAAGCCATCA AAGATAACTGATTTAAGCAATCCAAGAGTTTTGGATTTGTGCAGTGGTATGGGATACAATGCTATAGCTGCTTTACATTA TAACAAAAATGCAGAGATTGATATGGTTGAGATTTGTGAGGAAGTTTTATTTTTAACTTTATTTTTAGATATTCCATATA AAGAGCATGAGATTATAAAAGATAAAGTTAGAGAGTATTTTTTAAATAAAATTGGCATTGAATATAAGTCAGATTATGAT AATATCAATCTATACGTTGGAGATGCGAGAAAATTTATAATAAAGAGTGATAAAAAATACAATGTGGTTTTTCACGATGC ATTTTCACCAAAAAGAGACCCTACCCTCTACACTTACGATTTTTTGAAAGAAATTTATAAAAGAATGGAAGATAATGGAG TTTTGATATCTTACTCTTCAGCCATTCCATTTAGAAGTGCTTTGGTTGATTGTGGTTTTGTAATTTCAGAAAAGGAGAGT GTTGGGAGAAAAAGAGGAATAACCTTAGCTTATAAAAACCCAAATTTTAAACCAAATAGAATTAATGAGGTTGATGAGAG AGTTATAGCTTTATCAGTTATAGCTTTACCTTATAGGGATGAAACATTAAGCTTAACTAAAGATAAAATAATAGAGGATA GAGAGGAAAGAAGAGAAAAGTTAAAAGAAAAATTAATTAAAATAGGAAAATATCTATCAACAAAACAGATAAAAAAAGGT AACATCCCAGAAGAAATTTTAAAAATTCAAAAAGAGGATTTAAACTCATCAGAAATAATTAAAAAGATGAGATTGAAGTT TTTCAAAGATGCAAACATTTTTATACTATAA
Upstream 100 bases:
>100_bases TTTAAAACAGTAGATGAGTGTGTTAAATTAGAATTAAAAAACTTCTATAGGTTAGGAGAAGGAATTGTATTGGAATTTAA AGTAAAGAAATAAATATAAT
Downstream 100 bases:
>100_bases GCCCATAGTTGTTGAGGATGCTAAAATCTCTTTTTAGCATCTTTAAAAATTAAATTTTATTGGAAGTGGAATATATGAAT TTTAACGAATTAAATTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRVMLPNKKALEIIRKYMKIYNGKNEKDIKERLIKELKEEHVLVETEDGTYTLKAEDEEEMMHSKVGALKEAIYKFAKPS KITDLSNPRVLDLCSGMGYNAIAALHYNKNAEIDMVEICEEVLFLTLFLDIPYKEHEIIKDKVREYFLNKIGIEYKSDYD NINLYVGDARKFIIKSDKKYNVVFHDAFSPKRDPTLYTYDFLKEIYKRMEDNGVLISYSSAIPFRSALVDCGFVISEKES VGRKRGITLAYKNPNFKPNRINEVDERVIALSVIALPYRDETLSLTKDKIIEDREERREKLKEKLIKIGKYLSTKQIKKG NIPEEILKIQKEDLNSSEIIKKMRLKFFKDANIFIL
Sequences:
>Translated_356_residues MRVMLPNKKALEIIRKYMKIYNGKNEKDIKERLIKELKEEHVLVETEDGTYTLKAEDEEEMMHSKVGALKEAIYKFAKPS KITDLSNPRVLDLCSGMGYNAIAALHYNKNAEIDMVEICEEVLFLTLFLDIPYKEHEIIKDKVREYFLNKIGIEYKSDYD NINLYVGDARKFIIKSDKKYNVVFHDAFSPKRDPTLYTYDFLKEIYKRMEDNGVLISYSSAIPFRSALVDCGFVISEKES VGRKRGITLAYKNPNFKPNRINEVDERVIALSVIALPYRDETLSLTKDKIIEDREERREKLKEKLIKIGKYLSTKQIKKG NIPEEILKIQKEDLNSSEIIKKMRLKFFKDANIFIL >Mature_356_residues MRVMLPNKKALEIIRKYMKIYNGKNEKDIKERLIKELKEEHVLVETEDGTYTLKAEDEEEMMHSKVGALKEAIYKFAKPS KITDLSNPRVLDLCSGMGYNAIAALHYNKNAEIDMVEICEEVLFLTLFLDIPYKEHEIIKDKVREYFLNKIGIEYKSDYD NINLYVGDARKFIIKSDKKYNVVFHDAFSPKRDPTLYTYDFLKEIYKRMEDNGVLISYSSAIPFRSALVDCGFVISEKES VGRKRGITLAYKNPNFKPNRINEVDERVIALSVIALPYRDETLSLTKDKIIEDREERREKLKEKLIKIGKYLSTKQIKKG NIPEEILKIQKEDLNSSEIIKKMRLKFFKDANIFIL
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y670_METJA (Q58084)
Other databases:
- EMBL: L77117 - PIR: F64383 - RefSeq: NP_247654.1 - ProteinModelPortal: Q58084 - SMR: Q58084 - GeneID: 1451536 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0670 - NMPDR: fig|243232.1.peg.691 - TIGR: MJ0670 - HOGENOM: HBG539106 - OMA: EIIKNRE - ProtClustDB: CLSK876286 - BioCyc: MJAN243232:MJ_0670-MONOMER - InterPro: IPR008471
Pfam domain/function: PF05430 DUF752
EC number: NA
Molecular weight: Translated: 41684; Mature: 41684
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMLPNKKALEIIRKYMKIYNGKNEKDIKERLIKELKEEHVLVETEDGTYTLKAEDEEE CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHH MMHSKVGALKEAIYKFAKPSKITDLSNPRVLDLCSGMGYNAIAALHYNKNAEIDMVEICE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCEEHHHHHH EVLFLTLFLDIPYKEHEIIKDKVREYFLNKIGIEYKSDYDNINLYVGDARKFIIKSDKKY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEE NVVFHDAFSPKRDPTLYTYDFLKEIYKRMEDNGVLISYSSAIPFRSALVDCGFVISEKES EEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEECHHH VGRKRGITLAYKNPNFKPNRINEVDERVIALSVIALPYRDETLSLTKDKIIEDREERREK HHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHH LKEKLIKIGKYLSTKQIKKGNIPEEILKIQKEDLNSSEIIKKMRLKFFKDANIFIL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure MRVMLPNKKALEIIRKYMKIYNGKNEKDIKERLIKELKEEHVLVETEDGTYTLKAEDEEE CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHH MMHSKVGALKEAIYKFAKPSKITDLSNPRVLDLCSGMGYNAIAALHYNKNAEIDMVEICE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCEEHHHHHH EVLFLTLFLDIPYKEHEIIKDKVREYFLNKIGIEYKSDYDNINLYVGDARKFIIKSDKKY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEE NVVFHDAFSPKRDPTLYTYDFLKEIYKRMEDNGVLISYSSAIPFRSALVDCGFVISEKES EEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEECHHH VGRKRGITLAYKNPNFKPNRINEVDERVIALSVIALPYRDETLSLTKDKIIEDREERREK HHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHH LKEKLIKIGKYLSTKQIKKGNIPEEILKIQKEDLNSSEIIKKMRLKFFKDANIFIL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087