Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668846

Identifier: 15668846

GI number: 15668846

Start: 590176

End: 591201

Strand: Reverse

Name: 15668846

Synonym: MJ0665

Alternate gene names: NA

Gene position: 591201-590176 (Counterclockwise)

Preceding gene: 15668847

Following gene: 15668843

Centisome position: 35.51

GC content: 31.77

Gene sequence:

>1026_bases
GTGATTAACTTGGATGTATGGATTGATTTAACAAACGCCCCCCATGTGCATTATTTCTGCCAATTGATAAAAAAATTTGA
GAAAGAAGGGATTGAGTATTTATTAACTTTTAGAGATTCAGGGAATTTAGCTAAATTAGTTGAAATTTACAATTTTGTAG
GGAAGTGTATAGGAAAGCATGGAAACACGTTGAAGGATAAGTTAATTTTCTACGCTGAGAGGGTTATTGGATTAACTGAA
CTAATATCAAATGTAAAGCCAAAAGTAGCTATAGCAAAACACTCCGTTGAGTTGCCAAGGGTAGCTTTTGGTTTGAACAT
TCCAGTAATCTTTGTTGTAGATAATGAACACGCTGAAGCTCAAAATAAATTAACTCTACCATTGGCAGATGAGATTATTA
AACCTATAGCAACAGATGAAAATAAGCTGAAAGAATTTGGAGGAAGAAATTTTATAAGCTTTGAAGGAACTTGTGAAGTG
GCAAATGTAAATTCACGGCTAAAGGGTTATTATCCAATAGATAATGAAATTTTAAAAAAATTGGGAATTTGTGATGATAA
TCCAACAATAGTTATGAGACCTTGCCCAAACTCTTCTTATTGTAATGGACATAAAGATATACTACCAAAAATTATTGAAA
AGCTTCAAAAAAGAATTGACTGTAATATAGTTGTGTTCCCAAGGGATGAACATCAAAAAGAGATATATAGAGAGGTTAAT
GCTATAGTTCCAAAAGAGACAATAGATGCTCTTTCTTTATTGTATAATTCCGATTTCATGATTGGTGCTGGAGGAACGAT
GAACAGGGAAAGTGCTATCTTAGGCATTCCAACGGTATCTTGCTATCCTCAAGAGTTACTTGGAGTTGATAAATATTTAA
TTGAAAAAGATAGGATGATTCATACAAATGATATCAAGGAAATAATAAACTATGTTGAAGATAATTTAGGAAAAAGAATG
GGTGTTATTGAGTTAGAAGACCCAACTGATTTAATGTTTGAAAGGGTTTGTAATTATTTAAAATAA

Upstream 100 bases:

>100_bases
TTCTATTTGGAGGTGTGTCCCAATAGAGGGGCTATATCCCCTCTATAGTGCGATACCCAGAGGGAACTCTACGTTCAACC
CACTTAAATATATTTAATGG

Downstream 100 bases:

>100_bases
ATATTAAATATTAATTTTTCTTTGGAAATCTTCTATATAGACAGTTTGGATAATTTGTGCATCCCAAGAACTCTCCTTTT
TTTGTTCTAACTACTCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MINLDVWIDLTNAPHVHYFCQLIKKFEKEGIEYLLTFRDSGNLAKLVEIYNFVGKCIGKHGNTLKDKLIFYAERVIGLTE
LISNVKPKVAIAKHSVELPRVAFGLNIPVIFVVDNEHAEAQNKLTLPLADEIIKPIATDENKLKEFGGRNFISFEGTCEV
ANVNSRLKGYYPIDNEILKKLGICDDNPTIVMRPCPNSSYCNGHKDILPKIIEKLQKRIDCNIVVFPRDEHQKEIYREVN
AIVPKETIDALSLLYNSDFMIGAGGTMNRESAILGIPTVSCYPQELLGVDKYLIEKDRMIHTNDIKEIINYVEDNLGKRM
GVIELEDPTDLMFERVCNYLK

Sequences:

>Translated_341_residues
MINLDVWIDLTNAPHVHYFCQLIKKFEKEGIEYLLTFRDSGNLAKLVEIYNFVGKCIGKHGNTLKDKLIFYAERVIGLTE
LISNVKPKVAIAKHSVELPRVAFGLNIPVIFVVDNEHAEAQNKLTLPLADEIIKPIATDENKLKEFGGRNFISFEGTCEV
ANVNSRLKGYYPIDNEILKKLGICDDNPTIVMRPCPNSSYCNGHKDILPKIIEKLQKRIDCNIVVFPRDEHQKEIYREVN
AIVPKETIDALSLLYNSDFMIGAGGTMNRESAILGIPTVSCYPQELLGVDKYLIEKDRMIHTNDIKEIINYVEDNLGKRM
GVIELEDPTDLMFERVCNYLK
>Mature_341_residues
MINLDVWIDLTNAPHVHYFCQLIKKFEKEGIEYLLTFRDSGNLAKLVEIYNFVGKCIGKHGNTLKDKLIFYAERVIGLTE
LISNVKPKVAIAKHSVELPRVAFGLNIPVIFVVDNEHAEAQNKLTLPLADEIIKPIATDENKLKEFGGRNFISFEGTCEV
ANVNSRLKGYYPIDNEILKKLGICDDNPTIVMRPCPNSSYCNGHKDILPKIIEKLQKRIDCNIVVFPRDEHQKEIYREVN
AIVPKETIDALSLLYNSDFMIGAGGTMNRESAILGIPTVSCYPQELLGVDKYLIEKDRMIHTNDIKEIINYVEDNLGKRM
GVIELEDPTDLMFERVCNYLK

Specific function: Unknown

COG id: COG1817

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y665_METJA (Q58079)

Other databases:

- EMBL:   L77117
- PIR:   A64383
- RefSeq:   NP_247649.1
- ProteinModelPortal:   Q58079
- GeneID:   1451531
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0665
- NMPDR:   fig|243232.1.peg.686
- TIGR:   MJ0665
- HOGENOM:   HBG539104
- OMA:   AGGTMNR
- ProtClustDB:   CLSK865259
- BioCyc:   MJAN243232:MJ_0665-MONOMER
- InterPro:   IPR007152
- PIRSF:   PIRSF005357

Pfam domain/function: PF04007 DUF354

EC number: NA

Molecular weight: Translated: 38790; Mature: 38790

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLDVWIDLTNAPHVHYFCQLIKKFEKEGIEYLLTFRDSGNLAKLVEIYNFVGKCIGKH
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
GNTLKDKLIFYAERVIGLTELISNVKPKVAIAKHSVELPRVAFGLNIPVIFVVDNEHAEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCCC
QNKLTLPLADEIIKPIATDENKLKEFGGRNFISFEGTCEVANVNSRLKGYYPIDNEILKK
CCCEECCHHHHHHHHHCCCHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHH
LGICDDNPTIVMRPCPNSSYCNGHKDILPKIIEKLQKRIDCNIVVFPRDEHQKEIYREVN
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
AIVPKETIDALSLLYNSDFMIGAGGTMNRESAILGIPTVSCYPQELLGVDKYLIEKDRMI
HCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHCHHHHHHHCCCEE
HTNDIKEIINYVEDNLGKRMGVIELEDPTDLMFERVCNYLK
EHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MINLDVWIDLTNAPHVHYFCQLIKKFEKEGIEYLLTFRDSGNLAKLVEIYNFVGKCIGKH
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
GNTLKDKLIFYAERVIGLTELISNVKPKVAIAKHSVELPRVAFGLNIPVIFVVDNEHAEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCCC
QNKLTLPLADEIIKPIATDENKLKEFGGRNFISFEGTCEVANVNSRLKGYYPIDNEILKK
CCCEECCHHHHHHHHHCCCHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHH
LGICDDNPTIVMRPCPNSSYCNGHKDILPKIIEKLQKRIDCNIVVFPRDEHQKEIYREVN
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
AIVPKETIDALSLLYNSDFMIGAGGTMNRESAILGIPTVSCYPQELLGVDKYLIEKDRMI
HCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHCHHHHHHHCCCEE
HTNDIKEIINYVEDNLGKRMGVIELEDPTDLMFERVCNYLK
EHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087